HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:40.9 nTPM
HPA:40.9 nTPM
GTEx:25.4 nTPM
FANTOM5:190.0 Scaled Tags Per Million
Pig:55.3 nTPM
Mouse:84.8 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 40.9
1898 Male, age 80, left hemisphere 56.1
1855 Male, age 76, left hemisphere 45.9
2148 Female, age 91, left hemisphere 44.5
1911 Female, age 85, right hemisphere 37.2
2529 Female, age 94, left hemisphere 32.3
2621 Female, age 67, right hemisphere 29.2
Dentate gyrus
nTPM: 37.7
2530 Female, age 94, left hemisphere 52.6
2528 Male, age 74, both hemispheres 44.7
1927 Female, age 91, both hemispheres 43.8
2010 Male, age 76, both hemispheres 36.1
2246 Female, age 85, both hemispheres 29.8
2531 Female, age 67, both hemispheres 19.4
Entorhinal gyrus
nTPM: 22.9
2117 Female, age 91, right hemisphere 40.6
1938 Female, age 85, left hemisphere 25.5
2686 Male, age 75, right hemisphere 20.3
1787 Male, age 76, left hemisphere 18.8
2613 Female, age 94, left hemisphere 18.6
2764 Male, age 80, right hemisphere 13.9
Hippocampus, CA1
nTPM: 35.3
1873 Female, age 85, both hemispheres 59.7
2749 Male, age 80, left hemisphere 46.8
2527 Male, age 74, both hemispheres 26.6
2082 Female, age 91, right hemisphere 23.9
2045 Male, age 76, both hemispheres 19.6
Hippocampus, CA2
nTPM: 36.8
1963 Male, age 80, left hemisphere 61.2
1940 Female, age 85, left hemisphere 35.0
1892 Male, age 76, both hemispheres 34.9
2249 Male, age 74, both hemispheres 33.2
2113 Female, age 91, right hemisphere 29.2
2437 Female, age 94, left hemisphere 27.0
Hippocampus, CA3
nTPM: 26.3
1891 Female, age 85, both hemispheres 33.8
2861 Female, age 67, both hemispheres 31.2
2620 Female, age 94, left hemisphere 28.2
2137 Male, age 80, left hemisphere 24.5
1867 Male, age 76, both hemispheres 21.3
2436 Male, age 74, both hemispheres 18.7
Parahippocampal cortex
nTPM: 19.3
1990 Female, age 91, right hemisphere 23.6
2692 Male, age 74, both hemispheres 22.1
1850 Male, age 80, both hemispheres 21.3
1933 Female, age 85, both hemispheres 21.2
2245 Female, age 91, both hemispheres 20.2
2018 Male, age 76, both hemispheres 18.9
2250 Female, age 67, right hemisphere 18.0
2693 Female, age 94, both hemispheres 17.4
2622 Female, age 67, right hemisphere 16.3
2532 Female, age 72, left hemisphere 14.5
Perirhinal gyrus
nTPM: 17.1
1841 Female, age 85, right hemisphere 20.3
2848 Male, age 76, right hemisphere 18.1
1847 Female, age 91, left hemisphere 16.7
1794 Male, age 80, right hemisphere 16.1
2521 Female, age 94, right hemisphere 14.4
Subiculum
nTPM: 27.2
2729 Female, age 91, right hemisphere 48.7
1901 Male, age 80, both hemispheres 26.7
2042 Male, age 76, both hemispheres 25.3
2438 Female, age 94, left hemisphere 24.6
1977 Female, age 85, both hemispheres 19.0
2619 Male, age 74, both hemispheres 19.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 197

Max nTPM: 71.2
Min nTPM: 7.5
Std nTPM: 10.1
Median nTPM: 23.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 71.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 57.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 51.2
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 48.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 46.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 46.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 46.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 45.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 45.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 45.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 190.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 190.0
FF:10153-102I9 76 years, female 237.8
FF:10169-103B7 60 years, female 142.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.3
Samples: 4

Max nTPM: 66.3
Min nTPM: 38.4
Sample A Female 63.2
Sample B Female 66.3
Sample C Male 38.4
Sample D Male 53.3
Entorhinal cortex
nTPM: 26.9
Samples: 4

Max nTPM: 29.1
Min nTPM: 24.8
Sample A Female 26.7
Sample B Female 27.1
Sample C Male 29.1
Sample D Male 24.8
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 42.0
Min nTPM: 26.6
Sample A Female 42.0
Sample B Female 29.6
Sample C Male 31.9
Sample D Male 26.6
Ventral hippocampus
nTPM: 50.1
Samples: 4

Max nTPM: 62.5
Min nTPM: 41.2
Sample A Female 62.5
Sample B Female 41.2
Sample C Male 45.0
Sample D Male 51.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 84.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.1
Samples: 4

Max nTPM: 70.3
Min nTPM: 61.9
Sample A Male 61.9
Sample B Male 63.9
Sample C Female 64.3
Sample D Female 70.3
Hippocampal formation
nTPM: 84.8
Samples: 4

Max nTPM: 102.2
Min nTPM: 70.7
Sample A Male 77.9
Sample B Male 88.4
Sample C Female 102.2
Sample D Female 70.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
73818756 Antisense, RP_050921_02_B08, Mouse strain C57BL/6J (56 days, male) 6.5
71763534 Antisense, RP_050921_02_B08, Mouse strain C57BL/6J (56 days, male) 4.3

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