COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:9.3 nTPM
HPA:6.0 nTPM
GTEx:9.3 nTPM
FANTOM5:24.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 6.0
overview
Male, age 54 		Colon sample 67
nTPM: 5.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 4.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 8.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 4.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 8.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 6.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 5.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 9.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 9.3
Samples: 373

Max nTPM: 41.3
Min nTPM: 2.1
Std nTPM: 4.8
Median nTPM: 8.2
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 41.3
GTEX-15DZA-1026-SM-6PAND 30-39 years, female 32.7
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 25.8
GTEX-1AX9K-1626-SM-73KUS 50-59 years, male 24.0
GTEX-1A3MV-1026-SM-72D5U 30-39 years, male 23.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 23.2
GTEX-1S831-1726-SM-EWROJ 20-29 years, male 22.2
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 21.9
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 21.6
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 20.7
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 20.6
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Colon - Transverse
Average nTPM: 6.1
Samples: 406

Max nTPM: 27.4
Min nTPM: 1.3
Std nTPM: 3.8
Median nTPM: 5.0
GTEX-1HCU6-2726-SM-A9SKV 60-69 years, female 27.4
GTEX-15SHU-2526-SM-6M47D 40-49 years, female 23.9
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 21.5
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 19.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 17.8
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 17.7
GTEX-1KXAM-2126-SM-CY8I9 60-69 years, male 17.7
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 17.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 17.0
GTEX-1C6VQ-2726-SM-73KUL 50-59 years, male 16.7
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 16.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 24.5
FF:10014-101C5 62,83,84 years, mixed 24.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.