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PPP1R3C
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:49.2 nTPM
FANTOM5:91.9 Scaled Tags Per Million
Pig:22.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA027041
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 49.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.2
Samples: 246

Max nTPM: 172.4
Min nTPM: 7.6
Std nTPM: 26.6
Median nTPM: 43.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 172.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 169.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 132.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 126.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 121.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 121.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 120.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 118.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 110.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 103.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 98.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 97.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 97.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 96.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 96.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 94.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 94.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 94.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 93.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 93.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 90.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 83.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 82.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 82.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 81.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 81.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 80.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 79.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 77.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 77.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 77.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 76.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 76.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 76.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 75.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 75.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 75.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 74.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 72.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 72.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 72.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 71.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 69.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 68.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 68.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 67.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 66.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 66.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 65.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 65.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 64.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 64.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 64.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 63.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 63.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 63.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 62.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 62.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 62.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 61.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 60.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 60.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 58.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 58.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 57.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 57.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 57.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 57.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 56.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 55.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 55.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 54.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 53.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 53.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 53.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 52.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 52.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 52.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 52.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 51.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 50.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 50.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 49.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 49.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 49.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 49.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 49.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 49.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 48.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 48.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 47.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 47.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 47.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 47.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 46.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 45.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 45.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 45.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 45.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 45.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 44.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 44.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 43.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 43.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 43.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 43.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 43.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 42.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 42.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 42.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 41.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 40.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 39.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 38.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 38.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 38.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 38.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 37.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 37.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 37.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 37.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 37.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 36.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 36.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 36.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 36.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 36.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 36.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 35.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 35.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 35.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 35.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 35.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 34.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 33.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 33.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 33.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 33.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 32.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 32.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 32.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 31.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 31.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 31.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 31.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 31.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 31.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 31.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 31.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 30.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 30.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 30.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 29.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 29.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 29.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 28.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 27.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 27.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 27.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 27.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 27.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 27.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 26.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 26.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 26.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 26.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 26.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 25.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 25.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 25.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 24.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 24.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 24.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 23.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 23.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 23.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 23.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 22.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 22.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 22.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 22.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 22.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 21.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 21.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 20.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 20.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 20.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 20.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 19.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 19.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 19.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 18.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 18.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 17.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 16.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 15.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 14.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 13.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 13.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 13.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 9.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 9.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 9.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 7.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 7.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 91.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 91.9
FF:10164-103B2 76 years, female 91.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 22.5
Pig sample Sample description nTPM
Caudate
nTPM: 22.5
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.8
Sample A Female 16.8
Sample B Female 23.4
Sample C Male 26.5
Sample D Male 23.4

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