HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.7 nTPM
HPA:26.7 nTPM
GTEx:24.3 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Pig:41.2 nTPM
Mouse:122.7 nTPM
Allen mouse:16.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
1898 Male, age 80, left hemisphere 27.4
1855 Male, age 76, left hemisphere 21.5
2148 Female, age 91, left hemisphere 21.3
2529 Female, age 94, left hemisphere 19.8
2621 Female, age 67, right hemisphere 19.4
1911 Female, age 85, right hemisphere 19.0
Dentate gyrus
nTPM: 23.9
2530 Female, age 94, left hemisphere 25.3
2531 Female, age 67, both hemispheres 25.0
2010 Male, age 76, both hemispheres 24.4
1927 Female, age 91, both hemispheres 23.9
2528 Male, age 74, both hemispheres 23.8
2246 Female, age 85, both hemispheres 20.8
Entorhinal gyrus
nTPM: 25.2
2764 Male, age 80, right hemisphere 30.5
2613 Female, age 94, left hemisphere 29.9
1938 Female, age 85, left hemisphere 26.9
1787 Male, age 76, left hemisphere 25.3
2117 Female, age 91, right hemisphere 20.8
2686 Male, age 75, right hemisphere 17.9
Hippocampus, CA1
nTPM: 23.3
2749 Male, age 80, left hemisphere 28.3
2045 Male, age 76, both hemispheres 27.3
1873 Female, age 85, both hemispheres 22.9
2527 Male, age 74, both hemispheres 21.4
2082 Female, age 91, right hemisphere 16.6
Hippocampus, CA2
nTPM: 22.3
1892 Male, age 76, both hemispheres 25.2
1963 Male, age 80, left hemisphere 24.3
2249 Male, age 74, both hemispheres 23.4
2437 Female, age 94, left hemisphere 22.6
1940 Female, age 85, left hemisphere 20.7
2113 Female, age 91, right hemisphere 17.7
Hippocampus, CA3
nTPM: 22.6
2620 Female, age 94, left hemisphere 27.7
2137 Male, age 80, left hemisphere 24.5
2861 Female, age 67, both hemispheres 22.4
1867 Male, age 76, both hemispheres 21.8
1891 Female, age 85, both hemispheres 20.4
2436 Male, age 74, both hemispheres 18.8
Parahippocampal cortex
nTPM: 22.5
1850 Male, age 80, both hemispheres 27.5
1990 Female, age 91, right hemisphere 26.7
1933 Female, age 85, both hemispheres 25.1
2532 Female, age 72, left hemisphere 23.6
2245 Female, age 91, both hemispheres 22.0
2250 Female, age 67, right hemisphere 21.1
2693 Female, age 94, both hemispheres 20.5
2018 Male, age 76, both hemispheres 20.3
2622 Female, age 67, right hemisphere 19.5
2692 Male, age 74, both hemispheres 18.4
Perirhinal gyrus
nTPM: 26.7
1847 Female, age 91, left hemisphere 30.0
1794 Male, age 80, right hemisphere 29.4
2521 Female, age 94, right hemisphere 25.8
1841 Female, age 85, right hemisphere 25.5
2848 Male, age 76, right hemisphere 22.7
Subiculum
nTPM: 21.5
1977 Female, age 85, both hemispheres 27.0
1901 Male, age 80, both hemispheres 23.1
2619 Male, age 74, both hemispheres 21.0
2729 Female, age 91, right hemisphere 20.1
2042 Male, age 76, both hemispheres 19.4
2438 Female, age 94, left hemisphere 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 51.0
Min nTPM: 9.3
Std nTPM: 7.6
Median nTPM: 23.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 51.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 40.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 39.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 39.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 39.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 39.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 38.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 38.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 37.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.3
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.2
Samples: 4

Max nTPM: 52.9
Min nTPM: 33.8
Sample A Female 52.9
Sample B Female 43.5
Sample C Male 34.6
Sample D Male 33.8
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 40.6
Min nTPM: 31.9
Sample A Female 36.3
Sample B Female 40.6
Sample C Male 39.0
Sample D Male 31.9
Subiculum
nTPM: 33.8
Samples: 4

Max nTPM: 46.4
Min nTPM: 28.6
Sample A Female 46.4
Sample B Female 29.0
Sample C Male 31.3
Sample D Male 28.6
Ventral hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 48.1
Min nTPM: 24.5
Sample A Female 34.7
Sample B Female 24.5
Sample C Male 35.9
Sample D Male 48.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.7
Samples: 4

Max nTPM: 108.3
Min nTPM: 89.1
Sample A Male 89.1
Sample B Male 97.0
Sample C Female 96.3
Sample D Female 108.3
Hippocampal formation
nTPM: 122.7
Samples: 4

Max nTPM: 135.9
Min nTPM: 110.1
Sample A Male 111.7
Sample B Male 133.1
Sample C Female 135.9
Sample D Female 110.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.4
69837962 Antisense, RP_050224_01_C02, Mouse strain C57BL/6J (56 days, male) 16.4

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