HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.1 nTPM
HPA:16.1 nTPM
GTEx:13.5 nTPM
FANTOM5:46.1 Scaled Tags Per Million
Pig:6.3 nTPM
Mouse:23.8 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038965
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.2
2529 Female, age 94, left hemisphere 16.3
1898 Male, age 80, left hemisphere 15.8
1911 Female, age 85, right hemisphere 15.4
2621 Female, age 67, right hemisphere 14.9
1855 Male, age 76, left hemisphere 14.8
2148 Female, age 91, left hemisphere 14.0
Dentate gyrus
nTPM: 15.0
2010 Male, age 76, both hemispheres 15.6
2530 Female, age 94, left hemisphere 15.6
2246 Female, age 85, both hemispheres 15.5
1927 Female, age 91, both hemispheres 14.7
2531 Female, age 67, both hemispheres 14.6
2528 Male, age 74, both hemispheres 13.7
Entorhinal gyrus
nTPM: 15.1
1938 Female, age 85, left hemisphere 16.6
2613 Female, age 94, left hemisphere 14.9
2686 Male, age 75, right hemisphere 14.9
1787 Male, age 76, left hemisphere 14.8
2764 Male, age 80, right hemisphere 14.8
2117 Female, age 91, right hemisphere 14.6
Hippocampus, CA1
nTPM: 15.3
2527 Male, age 74, both hemispheres 16.3
2749 Male, age 80, left hemisphere 15.6
1873 Female, age 85, both hemispheres 15.5
2045 Male, age 76, both hemispheres 15.1
2082 Female, age 91, right hemisphere 13.9
Hippocampus, CA2
nTPM: 14.8
1892 Male, age 76, both hemispheres 15.5
1940 Female, age 85, left hemisphere 15.3
2437 Female, age 94, left hemisphere 15.0
2249 Male, age 74, both hemispheres 14.8
2113 Female, age 91, right hemisphere 14.3
1963 Male, age 80, left hemisphere 14.2
Hippocampus, CA3
nTPM: 14.9
2137 Male, age 80, left hemisphere 16.7
1891 Female, age 85, both hemispheres 15.6
1867 Male, age 76, both hemispheres 14.8
2436 Male, age 74, both hemispheres 14.6
2620 Female, age 94, left hemisphere 14.0
2861 Female, age 67, both hemispheres 13.7
Parahippocampal cortex
nTPM: 15.4
1850 Male, age 80, both hemispheres 16.8
2245 Female, age 91, both hemispheres 16.5
1933 Female, age 85, both hemispheres 15.8
2018 Male, age 76, both hemispheres 15.3
2532 Female, age 72, left hemisphere 15.3
2693 Female, age 94, both hemispheres 15.3
2250 Female, age 67, right hemisphere 15.1
2692 Male, age 74, both hemispheres 15.1
1990 Female, age 91, right hemisphere 14.8
2622 Female, age 67, right hemisphere 13.6
Perirhinal gyrus
nTPM: 16.1
1841 Female, age 85, right hemisphere 16.9
2521 Female, age 94, right hemisphere 16.1
1794 Male, age 80, right hemisphere 16.0
2848 Male, age 76, right hemisphere 16.0
1847 Female, age 91, left hemisphere 15.4
Subiculum
nTPM: 15.3
1901 Male, age 80, both hemispheres 16.4
2438 Female, age 94, left hemisphere 16.1
2042 Male, age 76, both hemispheres 15.5
1977 Female, age 85, both hemispheres 15.2
2619 Male, age 74, both hemispheres 14.5
2729 Female, age 91, right hemisphere 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 22.8
Min nTPM: 9.1
Std nTPM: 2.3
Median nTPM: 13.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 22.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 21.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 21.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 20.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 19.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 18.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 18.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 17.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 17.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.1
FF:10169-103B7 60 years, female 54.4
FF:10153-102I9 76 years, female 37.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.3
Sample A Female 5.3
Sample B Female 5.8
Sample C Male 6.1
Sample D Male 7.2
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 6.0
Sample C Male 5.8
Sample D Male 7.0
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.1
Sample A Female 5.1
Sample B Female 6.5
Sample C Male 6.5
Sample D Male 7.0
Ventral hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.8
Sample A Female 6.1
Sample B Female 6.5
Sample C Male 4.8
Sample D Male 6.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.4
Samples: 4

Max nTPM: 24.1
Min nTPM: 21.7
Sample A Male 21.7
Sample B Male 24.1
Sample C Female 23.8
Sample D Female 24.0
Hippocampal formation
nTPM: 23.8
Samples: 4

Max nTPM: 24.5
Min nTPM: 22.5
Sample A Male 24.5
Sample B Male 24.1
Sample C Female 24.0
Sample D Female 22.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68744546 Antisense, RP_050208_01_B04, Mouse strain C57BL/6J (56 days, male) 0.6

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