HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:17.2 nTPM
FANTOM5:25.6 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:18.3 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003526
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.9
2529 Female, age 94, left hemisphere 22.6
2148 Female, age 91, left hemisphere 22.4
1898 Male, age 80, left hemisphere 22.3
1911 Female, age 85, right hemisphere 22.0
1855 Male, age 76, left hemisphere 21.3
2621 Female, age 67, right hemisphere 20.8
Dentate gyrus
nTPM: 21.7
2528 Male, age 74, both hemispheres 22.6
1927 Female, age 91, both hemispheres 22.3
2010 Male, age 76, both hemispheres 21.8
2246 Female, age 85, both hemispheres 21.8
2531 Female, age 67, both hemispheres 21.7
2530 Female, age 94, left hemisphere 19.9
Entorhinal gyrus
nTPM: 21.8
1787 Male, age 76, left hemisphere 22.3
2686 Male, age 75, right hemisphere 22.3
2764 Male, age 80, right hemisphere 21.8
2117 Female, age 91, right hemisphere 21.5
2613 Female, age 94, left hemisphere 21.4
1938 Female, age 85, left hemisphere 21.2
Hippocampus, CA1
nTPM: 22.7
2045 Male, age 76, both hemispheres 24.8
1873 Female, age 85, both hemispheres 22.7
2527 Male, age 74, both hemispheres 22.6
2082 Female, age 91, right hemisphere 22.3
2749 Male, age 80, left hemisphere 21.0
Hippocampus, CA2
nTPM: 22.2
1892 Male, age 76, both hemispheres 23.0
1940 Female, age 85, left hemisphere 22.5
2249 Male, age 74, both hemispheres 22.5
1963 Male, age 80, left hemisphere 22.1
2113 Female, age 91, right hemisphere 21.6
2437 Female, age 94, left hemisphere 21.3
Hippocampus, CA3
nTPM: 22.2
2436 Male, age 74, both hemispheres 23.1
1867 Male, age 76, both hemispheres 22.6
1891 Female, age 85, both hemispheres 22.5
2620 Female, age 94, left hemisphere 22.5
2861 Female, age 67, both hemispheres 22.2
2137 Male, age 80, left hemisphere 20.4
Parahippocampal cortex
nTPM: 22.7
2622 Female, age 67, right hemisphere 24.1
2693 Female, age 94, both hemispheres 23.9
1850 Male, age 80, both hemispheres 23.6
2692 Male, age 74, both hemispheres 23.0
1933 Female, age 85, both hemispheres 22.7
1990 Female, age 91, right hemisphere 22.7
2245 Female, age 91, both hemispheres 22.4
2250 Female, age 67, right hemisphere 22.1
2018 Male, age 76, both hemispheres 21.8
2532 Female, age 72, left hemisphere 21.1
Perirhinal gyrus
nTPM: 23.0
2848 Male, age 76, right hemisphere 23.9
1841 Female, age 85, right hemisphere 23.1
2521 Female, age 94, right hemisphere 23.1
1794 Male, age 80, right hemisphere 22.5
1847 Female, age 91, left hemisphere 22.5
Subiculum
nTPM: 21.6
2729 Female, age 91, right hemisphere 22.6
2619 Male, age 74, both hemispheres 22.4
2438 Female, age 94, left hemisphere 21.6
1977 Female, age 85, both hemispheres 21.5
2042 Male, age 76, both hemispheres 20.9
1901 Male, age 80, both hemispheres 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 32.1
Min nTPM: 6.5
Std nTPM: 3.6
Median nTPM: 16.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 32.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 26.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 26.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 24.9
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 24.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 24.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 24.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 24.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 24.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 23.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.6
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 24.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.5
Sample A Female 7.3
Sample B Female 7.8
Sample C Male 6.5
Sample D Male 8.8
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.2
Sample A Female 7.2
Sample B Female 7.8
Sample C Male 7.4
Sample D Male 8.7
Subiculum
nTPM: 7.8
Samples: 4

Max nTPM: 7.9
Min nTPM: 7.6
Sample A Female 7.6
Sample B Female 7.7
Sample C Male 7.8
Sample D Male 7.9
Ventral hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.3
Sample A Female 7.1
Sample B Female 8.1
Sample C Male 5.3
Sample D Male 7.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.2
Sample A Male 13.2
Sample B Male 17.6
Sample C Female 18.2
Sample D Female 15.2
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 21.0
Min nTPM: 15.8
Sample A Male 19.7
Sample B Male 21.0
Sample C Female 15.8
Sample D Female 16.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
68924614 Antisense, RP_050303_02_F10, Mouse strain C57BL/6J (56 days, male) 2.9
70231999 Antisense, RP_050303_02_F10, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

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