HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.8 nTPM
HPA:42.8 nTPM
GTEx:39.4 nTPM
FANTOM5:42.5 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:30.8 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038339
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.8
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
1855 Male, age 76, left hemisphere 44.6
1898 Male, age 80, left hemisphere 44.3
2621 Female, age 67, right hemisphere 43.0
2529 Female, age 94, left hemisphere 41.2
1911 Female, age 85, right hemisphere 40.8
2148 Female, age 91, left hemisphere 39.1
Dentate gyrus
nTPM: 41.7
2010 Male, age 76, both hemispheres 45.1
2530 Female, age 94, left hemisphere 42.5
1927 Female, age 91, both hemispheres 41.9
2246 Female, age 85, both hemispheres 41.7
2528 Male, age 74, both hemispheres 40.9
2531 Female, age 67, both hemispheres 38.3
Entorhinal gyrus
nTPM: 39.5
1938 Female, age 85, left hemisphere 41.0
2613 Female, age 94, left hemisphere 40.7
1787 Male, age 76, left hemisphere 40.0
2764 Male, age 80, right hemisphere 39.8
2117 Female, age 91, right hemisphere 38.5
2686 Male, age 75, right hemisphere 36.8
Hippocampus, CA1
nTPM: 42.2
2749 Male, age 80, left hemisphere 44.6
2527 Male, age 74, both hemispheres 42.8
1873 Female, age 85, both hemispheres 42.2
2045 Male, age 76, both hemispheres 41.5
2082 Female, age 91, right hemisphere 39.8
Hippocampus, CA2
nTPM: 41.2
1892 Male, age 76, both hemispheres 45.2
1940 Female, age 85, left hemisphere 41.3
1963 Male, age 80, left hemisphere 40.7
2249 Male, age 74, both hemispheres 40.4
2437 Female, age 94, left hemisphere 40.0
2113 Female, age 91, right hemisphere 39.9
Hippocampus, CA3
nTPM: 41.3
1867 Male, age 76, both hemispheres 43.7
2436 Male, age 74, both hemispheres 41.9
2137 Male, age 80, left hemisphere 41.8
2620 Female, age 94, left hemisphere 40.7
1891 Female, age 85, both hemispheres 40.2
2861 Female, age 67, both hemispheres 39.3
Parahippocampal cortex
nTPM: 41.0
1850 Male, age 80, both hemispheres 43.1
2018 Male, age 76, both hemispheres 41.6
1933 Female, age 85, both hemispheres 41.5
2250 Female, age 67, right hemisphere 41.4
2532 Female, age 72, left hemisphere 41.1
1990 Female, age 91, right hemisphere 41.0
2245 Female, age 91, both hemispheres 40.6
2622 Female, age 67, right hemisphere 40.3
2692 Male, age 74, both hemispheres 39.8
2693 Female, age 94, both hemispheres 39.4
Perirhinal gyrus
nTPM: 42.8
1847 Female, age 91, left hemisphere 44.6
1794 Male, age 80, right hemisphere 42.9
1841 Female, age 85, right hemisphere 42.7
2521 Female, age 94, right hemisphere 42.4
2848 Male, age 76, right hemisphere 41.2
Subiculum
nTPM: 41.4
2438 Female, age 94, left hemisphere 42.8
1977 Female, age 85, both hemispheres 42.3
2042 Male, age 76, both hemispheres 41.6
2619 Male, age 74, both hemispheres 41.1
1901 Male, age 80, both hemispheres 40.4
2729 Female, age 91, right hemisphere 40.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.4
Samples: 197

Max nTPM: 71.9
Min nTPM: 21.7
Std nTPM: 9.2
Median nTPM: 38.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 71.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 68.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 64.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 63.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 59.9
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 59.6
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 58.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 58.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 57.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 57.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.5
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 40.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 29.7
Min nTPM: 22.4
Sample A Female 29.7
Sample B Female 22.8
Sample C Male 26.7
Sample D Male 22.4
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 22.5
Min nTPM: 19.2
Sample A Female 21.3
Sample B Female 22.5
Sample C Male 20.8
Sample D Male 19.2
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 19.5
Sample A Female 21.6
Sample B Female 22.4
Sample C Male 19.5
Sample D Male 23.4
Ventral hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 23.5
Min nTPM: 20.9
Sample A Female 23.5
Sample B Female 22.6
Sample C Male 20.9
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 30.4
Min nTPM: 26.2
Sample A Male 26.2
Sample B Male 30.4
Sample C Female 27.6
Sample D Female 27.0
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 37.5
Min nTPM: 25.9
Sample A Male 37.5
Sample B Male 27.3
Sample C Female 25.9
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68522344 Antisense, RP_050118_01_H04, Mouse strain C57BL/6J (56 days, male) 1.6

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