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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:7552.5 nTPM
FANTOM5:4903.0 Scaled Tags Per Million
Pig:3112.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA000572Antibody CAB016253
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 7552.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 7552.5
Samples: 246

Max nTPM: 20948.3
Min nTPM: 934.9
Std nTPM: 3161.2
Median nTPM: 7028.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20948.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18128.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 17770.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 17455.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 16371.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 15796.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 15207.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 15101.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14785.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14606.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 14441.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 13961.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 13923.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 13533.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 13119.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12860.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12804.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 12796.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 12735.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 12620.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 12433.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 12427.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 12232.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11954.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11869.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 11849.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11738.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 11666.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11602.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 11515.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 11239.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 11052.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 11028.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 10880.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 10747.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10673.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 10529.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 10356.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 10346.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 10329.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 10318.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 10098.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 10091.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 10041.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9845.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 9747.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 9562.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 9456.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9428.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 9415.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 9377.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 9273.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 9264.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 9196.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 9187.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 9120.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 9017.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 8992.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 8992.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 8984.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8976.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 8850.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 8811.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 8802.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 8755.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8739.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 8699.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 8688.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8683.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 8658.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 8539.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 8478.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8464.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 8440.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8414.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8404.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 8383.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 8358.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 8358.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 8310.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 8264.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 8212.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 8204.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8176.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 8141.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8122.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 8057.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7999.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7972.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 7947.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7928.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7927.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 7841.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 7786.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 7780.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 7745.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 7723.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7693.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 7647.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 7623.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 7586.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 7556.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 7537.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 7523.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7493.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 7477.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 7474.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 7470.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 7371.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 7328.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 7298.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 7288.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 7261.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 7223.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 7197.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 7167.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 7165.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 7163.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 7158.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 7073.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 7062.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 7050.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 7047.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 7008.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 7004.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 6966.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 6964.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 6923.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 6867.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6850.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 6825.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 6730.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 6721.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 6695.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 6654.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 6614.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 6603.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 6602.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 6581.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 6561.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 6547.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 6528.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 6488.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 6471.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 6467.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 6467.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6443.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 6426.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 6423.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 6413.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6355.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 6340.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 6327.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 6316.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 6313.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 6266.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 6251.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6237.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 6179.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 6139.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 6131.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 6129.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 6082.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 6076.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 6059.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 6055.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6024.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 6010.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6008.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 5995.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 5982.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 5941.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5868.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 5856.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 5793.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5765.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5761.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5751.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 5739.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 5701.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5697.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 5672.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5606.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 5603.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 5573.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5482.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 5410.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5386.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 5374.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 5353.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 5250.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 5201.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 5199.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 5154.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 5126.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 5114.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 5090.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 5085.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 5080.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5045.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 5039.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 4940.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 4937.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4933.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 4902.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4846.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 4830.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 4764.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 4723.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4715.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 4682.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 4618.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 4595.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 4504.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 4462.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 4430.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 4391.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 4358.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 4312.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 4274.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 4271.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4204.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 4044.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 4020.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 4007.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 3955.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 3923.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3892.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 3727.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 3651.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 3632.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 3601.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 3582.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 3544.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 3379.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 3159.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 3050.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2998.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 2889.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2855.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 2617.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 2243.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2069.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1621.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1512.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 934.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 4903.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 4903.1
FF:10164-103B2 76 years, female 4903.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3112.3
Pig sample Sample description nTPM
Caudate
nTPM: 3112.3
Samples: 4

Max nTPM: 4014.5
Min nTPM: 2171.4
Sample A Female 2171.4
Sample B Female 3432.4
Sample C Male 4014.5
Sample D Male 2831.0

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