PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:56.8 nTPM
HPA:56.8 nTPM
FANTOM5:113.4 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:112.2 nTPM
Allen mouse:4.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 56.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 51.0
2188 Female, age 91, both hemispheres 54.1
2090 Male, age 80, both hemispheres 52.0
1984 Male, age 76, both hemispheres 50.2
2301 Female, age 85, both hemispheres 47.9
Area postrema
nTPM: 49.1
2306 Male, age 80, both hemispheres 49.8
2799 Male, age 61, both hemispheres 49.5
2054 Male, age 76, both hemispheres 48.0
Cuneate nuclei
nTPM: 50.2
2381 Male, age 80, both hemispheres 50.9
2131 Male, age 76, both hemispheres 50.6
2376 Male, age 61, both hemispheres 49.2
Dorsal cochlear nucleus
nTPM: 51.3
2187 Female, age 91, both hemispheres 53.7
2802 Male, age 74, right hemisphere 52.9
2378 Male, age 80, both hemispheres 50.8
2058 Male, age 76, both hemispheres 50.7
2370 Male, age 61, both hemispheres 48.4
Dorsal medullary reticular nucleus
nTPM: 51.7
2040 Female, age 85, both hemispheres 57.3
2088 Male, age 76, both hemispheres 49.1
2373 Male, age 61, both hemispheres 48.7
Dorsal motor vagal complex
nTPM: 50.1
2133 Female, age 91, both hemispheres 55.7
2000 Male, age 74, unknown 54.2
2844 Male, age 55, unknown 52.0
2643 Male, age 74, both hemispheres 49.3
2813 Female, age 72, unknown 49.3
2185 Male, age 76, both hemispheres 47.3
2797 Male, age 61, both hemispheres 46.5
2807 Female, age 85, both hemispheres 46.2
Dorsal tegmental nucleus
nTPM: 52.3
2083 Male, age 80, both hemispheres 56.3
2326 Male, age 74, both hemispheres 54.0
1936 Male, age 76, left hemisphere 50.5
2358 Male, age 61, both hemispheres 48.3
Dorsolateral tegmental area
nTPM: 53.0
2751 Female, age 85, both hemispheres 57.3
2654 Male, age 80, both hemispheres 55.0
2360 Male, age 74, both hemispheres 52.5
2141 Male, age 76, both hemispheres 50.6
2337 Male, age 61, both hemispheres 49.3
Gigantocellular reticular nuclei, medullary
nTPM: 52.3
1876 Female, age 85, both hemispheres 57.4
2314 Male, age 61, both hemispheres 52.5
2462 Male, age 74, both hemispheres 51.9
2022 Male, age 76, right hemisphere 51.5
2387 Female, age 91, both hemispheres 51.4
2310 Male, age 80, both hemispheres 49.0
Gigantocellular reticular nuclei, pars
nTPM: 51.7
2084 Female, age 85, both hemispheres 55.7
2168 Male, age 76, both hemispheres 54.6
2336 Male, age 61, both hemispheres 51.4
2706 Male, age 80, both hemispheres 49.0
2330 Male, age 80, both hemispheres 47.6
Inferior olive
nTPM: 52.3
2563 Male, age 74, both hemispheres 56.0
2085 Female, age 85, both hemispheres 53.7
2178 Male, age 61, both hemispheres 52.8
2379 Male, age 80, both hemispheres 49.6
2628 Female, age 91, both hemispheres 49.6
Kolliker-Fuse nucleus
nTPM: 53.2
2163 Male, age 80, both hemispheres 55.2
2315 Male, age 76, right hemisphere 52.2
2793 Female, age 91, left hemisphere 52.1
Lateral lemniscal nuclei
nTPM: 52.3
2169 Male, age 76, both hemispheres 55.2
2746 Female, age 85, left hemisphere 53.4
2036 Male, age 80, both hemispheres 51.8
2453 Male, age 74, right hemisphere 51.1
2320 Female, age 91, left hemisphere 50.1
Lateral medullary reticular nucleus
nTPM: 54.1
2305 Male, age 74, both hemispheres 60.2
2044 Male, age 76, both hemispheres 55.1
2804 Female, age 91, both hemispheres 53.2
2190 Female, age 85, both hemispheres 53.0
2852 Male, age 80, both hemispheres 52.7
2374 Male, age 61, both hemispheres 50.7
Lateral parabrachial nucleus
nTPM: 52.6
2139 Female, age 85, right hemisphere 54.9
2013 Male, age 80, both hemispheres 53.4
2792 Male, age 76, both hemispheres 51.6
2790 Male, age 61, both hemispheres 50.5
Lateral vestibular nucleus
nTPM: 52.2
2184 Male, age 76, both hemispheres 54.2
2311 Male, age 80, both hemispheres 50.2
Locus coeruleus
nTPM: 54.1
2014 Male, age 55, unknown 58.3
2123 Female, age 91, both hemispheres 56.6
2788 Male, age 74, unknown 55.4
1980 Male, age 76, both hemispheres 53.7
2317 Female, age 72, unknown 52.7
2720 Male, age 74, both hemispheres 51.3
2162 Male, age 80, both hemispheres 50.7
Medial olivary nucleus
nTPM: 53.5
1943 Male, age 61, both hemispheres 56.6
2138 Female, age 91, both hemispheres 54.3
1962 Male, age 76, both hemispheres 53.4
2851 Male, age 80, both hemispheres 49.7
Medial parabrachial nucleus
nTPM: 53.3
2170 Female, age 91, both hemispheres 56.8
2463 Female, age 85, right hemisphere 55.2
2854 Male, age 80, both hemispheres 53.3
2786 Male, age 76, both hemispheres 51.3
2156 Male, age 61, both hemispheres 49.8
Medial periolivary nuclei
nTPM: 54.5
2063 Male, age 76, both hemispheres 58.9
2791 Male, age 74, right hemisphere 57.8
2171 Female, age 85, both hemispheres 55.3
2081 Male, age 80, both hemispheres 51.6
2458 Female, age 91, both hemispheres 48.9
Medial vestibular nucleus
nTPM: 54.9
2803 Female, age 91, both hemispheres 57.6
2801 Male, age 74, both hemispheres 57.0
2093 Male, age 80, both hemispheres 56.1
2743 Female, age 85, both hemispheres 55.0
2134 Male, age 76, both hemispheres 54.0
2624 Male, age 61, both hemispheres 49.9
Motor facial nucleus
nTPM: 52.9
2062 Male, age 76, both hemispheres 58.0
2365 Male, age 74, right hemisphere 56.4
2126 Male, age 61, both hemispheres 53.3
2697 Female, age 85, both hemispheres 50.8
2795 Female, age 91, both hemispheres 50.3
2327 Male, age 80, both hemispheres 48.5
Motor hypoglossal nucleus
nTPM: 52.2
2132 Female, age 85, both hemispheres 57.4
2125 Female, age 91, both hemispheres 56.8
2461 Male, age 61, both hemispheres 49.4
2182 Male, age 80, both hemispheres 49.1
2277 Male, age 76, both hemispheres 48.3
Motor trigeminal nucleus
nTPM: 50.5
2560 Male, age 74, both hemispheres 53.0
2309 Male, age 76, both hemispheres 51.9
2079 Male, age 80, both hemispheres 50.7
2321 Female, age 91, both hemispheres 48.9
2335 Male, age 61, both hemispheres 48.2
Nuclei of the trapezoid body
nTPM: 53.7
1983 Male, age 76, both hemispheres 57.7
2159 Male, age 61, both hemispheres 57.6
2735 Female, age 85, both hemispheres 54.7
2166 Male, age 80, both hemispheres 49.7
2368 Female, age 91, both hemispheres 48.9
Nucleus ambiguus
nTPM: 51.9
2071 Male, age 76, both hemispheres 53.4
2096 Female, age 85, both hemispheres 50.4
Nucleus cuneatus
nTPM: 49.2
2564 Male, age 74, both hemispheres 52.4
2808 Female, age 85, both hemispheres 49.8
2380 Male, age 80, both hemispheres 49.7
2100 Male, age 76, both hemispheres 49.3
2562 Male, age 61, both hemispheres 47.6
2805 Female, age 91, both hemispheres 46.6
Nucleus gracilis
nTPM: 51.3
2627 Male, age 74, both hemispheres 56.1
2382 Male, age 80, both hemispheres 51.1
2299 Female, age 85, both hemispheres 46.8
Nucleus raphe magnus
nTPM: 53.6
2160 Male, age 61, both hemispheres 59.2
2455 Male, age 74, both hemispheres 55.4
2051 Male, age 76, both hemispheres 53.4
2172 Female, age 85, both hemispheres 53.1
2328 Male, age 80, both hemispheres 50.6
2459 Female, age 91, both hemispheres 49.6
Nucleus raphe obscurus
nTPM: 54.3
2845 Female, age 85, midline 56.7
2800 Male, age 61, midline 55.2
2142 Male, age 76, midline 51.0
Nucleus raphe pallidus
nTPM: 55.0
1924 Male, age 61, midline 59.2
2183 Male, age 80, midline 53.9
2145 Male, age 76, midline 51.9
Nucleus tractus solitarii
nTPM: 49.3
2144 Female, age 91, right hemisphere 56.6
2656 Male, age 76, both hemispheres 49.0
2191 Female, age 85, both hemispheres 46.7
2307 Male, age 80, both hemispheres 44.7
Paramedian reticular nucleus
nTPM: 54.8
2050 Female, age 85, both hemispheres 57.7
2057 Male, age 80, both hemispheres 56.4
2313 Male, age 61, both hemispheres 52.7
2052 Male, age 76, both hemispheres 52.6
Parvicellular reticular nuclei
nTPM: 52.9
2119 Male, age 80, both hemispheres 54.8
2095 Male, age 76, both hemispheres 54.4
2558 Male, age 74, both hemispheres 49.5
Parvicellular reticular nuclei, medullary
nTPM: 53.4
2189 Female, age 91, both hemispheres 55.1
2091 Female, age 85, both hemispheres 55.0
2181 Male, age 80, left hemisphere 50.1
Peritrigeminal nucleus
nTPM: 55.1
2136 Male, age 76, both hemispheres 55.8
2067 Female, age 85, both hemispheres 55.5
2179 Male, age 61, both hemispheres 54.1
Pontine nuclei
nTPM: 56.8
1863 Male, age 55, unknown 61.5
2727 Male, age 61, right hemisphere 61.4
2109 Female, age 72, unknown 58.8
2454 Male, age 74, left hemisphere 58.1
2787 Female, age 85, both hemispheres 57.5
1968 Male, age 76, left hemisphere 55.5
2319 Female, age 91, both hemispheres 52.0
2115 Male, age 80, left hemisphere 49.5
Pontine raphe nucleus
nTPM: 54.6
2122 Female, age 85, midline 55.9
2853 Male, age 76, midline 53.2
Posteroventral cochlear nucleus
nTPM: 52.9
2752 Female, age 85, both hemispheres 55.4
2135 Female, age 91, both hemispheres 54.6
2341 Male, age 80, both hemispheres 54.3
2070 Male, age 76, both hemispheres 52.2
2371 Male, age 61, both hemispheres 48.1
Prepositus hypoglossal nucleus
nTPM: 53.8
2855 Female, age 85, right hemisphere 57.2
2086 Male, age 80, both hemispheres 50.4
Principal sensory trigeminal nucleus
nTPM: 52.5
2158 Male, age 61, both hemispheres 54.7
2008 Male, age 80, left hemisphere 52.7
2324 Male, age 76, both hemispheres 51.4
2367 Female, age 91, left hemisphere 51.2
Reticular pontine nucleus, caudal
nTPM: 52.9
2092 Male, age 76, both hemispheres 55.2
2559 Male, age 74, both hemispheres 54.6
2457 Female, age 91, both hemispheres 51.7
2332 Male, age 80, right hemisphere 49.8
Reticular pontine nucleus, oral
nTPM: 54.3
2012 Female, age 85, both hemispheres 56.3
1939 Male, age 80, both hemispheres 56.0
2361 Male, age 74, both hemispheres 53.4
2167 Male, age 76, both hemispheres 53.1
2366 Female, age 91, both hemispheres 52.7
Reticulotegmental nucleus
nTPM: 51.4
2325 Male, age 76, both hemispheres 52.5
2322 Female, age 91, both hemispheres 52.3
2452 Male, age 74, both hemispheres 51.2
2333 Male, age 80, both hemispheres 49.7
Spinal trigeminal nucleus, caudal
nTPM: 52.2
2390 Female, age 91, both hemispheres 56.8
2642 Male, age 74, both hemispheres 52.0
2447 Male, age 76, both hemispheres 51.4
2312 Male, age 61, both hemispheres 50.9
2308 Male, age 80, both hemispheres 50.0
Spinal trigeminal nucleus, interpolar
nTPM: 54.7
2066 Male, age 76, right hemisphere 58.1
2625 Male, age 61, both hemispheres 55.4
2033 Male, age 80, both hemispheres 54.5
2386 Female, age 85, both hemispheres 53.4
2389 Female, age 91, both hemispheres 52.1
Spinal trigeminal nucleus, oral
nTPM: 52.7
2737 Female, age 85, both hemispheres 54.6
2164 Male, age 80, both hemispheres 52.5
1978 Male, age 76, both hemispheres 51.0
Spinal vestibular nucleus
nTPM: 53.4
2806 Female, age 85, both hemispheres 56.5
2186 Female, age 91, both hemispheres 55.8
2748 Male, age 76, both hemispheres 54.1
2780 Male, age 80, both hemispheres 54.1
2384 Male, age 74, both hemispheres 51.3
2796 Male, age 61, both hemispheres 48.8
Subcoeruleus area
nTPM: 52.7
2369 Female, age 85, left hemisphere 56.7
1958 Male, age 80, both hemispheres 53.9
2323 Female, age 91, left hemisphere 52.2
2089 Male, age 76, left hemisphere 51.2
2451 Male, age 74, both hemispheres 49.6
Superior olive
nTPM: 54.1
2364 Male, age 74, right hemisphere 59.5
1875 Female, age 85, both hemispheres 56.4
2020 Male, age 76, both hemispheres 55.1
2329 Male, age 80, right hemisphere 50.4
2561 Female, age 91, both hemispheres 49.2
Superior vestibular nucleus
nTPM: 54.1
2383 Male, age 74, both hemispheres 57.3
2015 Male, age 80, both hemispheres 53.9
2061 Male, age 76, both hemispheres 51.2
Ventral medullary reticular nucleus
nTPM: 51.8
2060 Male, age 76, both hemispheres 51.8
2372 Male, age 61, both hemispheres 51.8
Ventral periolivary nuclei
nTPM: 52.0
2023 Male, age 76, both hemispheres 54.6
2165 Male, age 80, both hemispheres 54.1
2130 Female, age 85, both hemispheres 51.5
2794 Female, age 91, left hemisphere 47.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 53.7
2741 Female, age 85, both hemispheres 55.9
1986 Male, age 76, both hemispheres 55.7
2180 Male, age 61, both hemispheres 53.7
2118 Male, age 80, both hemispheres 52.2
2302 Female, age 91, both hemispheres 51.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 52.3
2449 Male, age 74, both hemispheres 54.0
1959 Male, age 76, both hemispheres 53.6
2840 Female, age 85, both hemispheres 53.3
2359 Male, age 61, both hemispheres 52.5
2161 Male, age 80, both hemispheres 50.9
2456 Female, age 91, both hemispheres 49.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 113.4
FF:10182-103D2 60 years, female 133.1
FF:10165-103B3 76 years, female 93.7
Medulla oblongata
Scaled Tags Per Million: 83.2
FF:10174-103C3 60 years, female 115.0
FF:10155-103A2 76 years, female 80.8
FF:10038-101F2 18-64 years, mixed 53.8
Pons
Scaled Tags Per Million: 86.2
FF:10033-101E6 18-54 years, mixed 86.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 28.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 26.8
Samples: 4

Max nTPM: 28.8
Min nTPM: 25.1
Sample A Female 26.8
Sample B Female 26.3
Sample C Male 28.8
Sample D Male 25.1
Pons
nTPM: 28.5
Samples: 4

Max nTPM: 30.1
Min nTPM: 25.8
Sample A Female 29.6
Sample B Female 25.8
Sample C Male 30.1
Sample D Male 28.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 112.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 112.2
Samples: 4

Max nTPM: 114.9
Min nTPM: 109.5
Sample A Male 109.5
Sample B Male 112.8
Sample C Female 111.6
Sample D Female 114.9

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.7
69568944 Antisense, RP_050426_03_B06, Mouse strain C57BL/6J (56 days, male) 4.7
Pons
Expression energy: 3.8
69568944 Antisense, RP_050426_03_B06, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

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