HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:9.4 nTPM
HPA:9.4 nTPM
GTEx:14.3 nTPM
FANTOM5:59.9 Scaled Tags Per Million
Pig:17.0 nTPM
Mouse:19.4 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013388Antibody HPA015592
Glial cells LowMedium
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.4
Sample id Sample description nTPM
Hippocampus
nTPM: 7.9
1898 Male, age 80, left hemisphere 8.5
1911 Female, age 85, right hemisphere 8.5
2621 Female, age 67, right hemisphere 8.2
2529 Female, age 94, left hemisphere 7.9
1855 Male, age 76, left hemisphere 7.1
2148 Female, age 91, left hemisphere 7.1
Dentate gyrus
nTPM: 7.9
2010 Male, age 76, both hemispheres 8.4
2528 Male, age 74, both hemispheres 8.3
2531 Female, age 67, both hemispheres 8.1
1927 Female, age 91, both hemispheres 7.8
2246 Female, age 85, both hemispheres 7.7
2530 Female, age 94, left hemisphere 7.2
Entorhinal gyrus
nTPM: 8.7
1938 Female, age 85, left hemisphere 10.2
2117 Female, age 91, right hemisphere 10.1
2764 Male, age 80, right hemisphere 8.3
2613 Female, age 94, left hemisphere 8.2
2686 Male, age 75, right hemisphere 8.0
1787 Male, age 76, left hemisphere 7.5
Hippocampus, CA1
nTPM: 8.2
2045 Male, age 76, both hemispheres 8.9
1873 Female, age 85, both hemispheres 8.4
2527 Male, age 74, both hemispheres 8.1
2082 Female, age 91, right hemisphere 7.9
2749 Male, age 80, left hemisphere 7.7
Hippocampus, CA2
nTPM: 8.3
2249 Male, age 74, both hemispheres 9.4
1940 Female, age 85, left hemisphere 9.2
2113 Female, age 91, right hemisphere 8.5
1892 Male, age 76, both hemispheres 7.9
2437 Female, age 94, left hemisphere 7.6
1963 Male, age 80, left hemisphere 7.5
Hippocampus, CA3
nTPM: 8.1
1891 Female, age 85, both hemispheres 10.0
1867 Male, age 76, both hemispheres 8.7
2436 Male, age 74, both hemispheres 8.2
2137 Male, age 80, left hemisphere 8.0
2861 Female, age 67, both hemispheres 7.4
2620 Female, age 94, left hemisphere 6.3
Parahippocampal cortex
nTPM: 9.4
2018 Male, age 76, both hemispheres 11.3
1850 Male, age 80, both hemispheres 10.8
2532 Female, age 72, left hemisphere 9.7
1933 Female, age 85, both hemispheres 9.4
2693 Female, age 94, both hemispheres 9.3
2622 Female, age 67, right hemisphere 9.2
2250 Female, age 67, right hemisphere 9.0
1990 Female, age 91, right hemisphere 8.7
2692 Male, age 74, both hemispheres 8.6
2245 Female, age 91, both hemispheres 7.8
Perirhinal gyrus
nTPM: 8.8
1841 Female, age 85, right hemisphere 9.2
1847 Female, age 91, left hemisphere 9.0
2521 Female, age 94, right hemisphere 8.8
2848 Male, age 76, right hemisphere 8.8
1794 Male, age 80, right hemisphere 8.4
Subiculum
nTPM: 8.6
1901 Male, age 80, both hemispheres 10.0
2042 Male, age 76, both hemispheres 9.9
1977 Female, age 85, both hemispheres 9.0
2619 Male, age 74, both hemispheres 8.4
2729 Female, age 91, right hemisphere 8.0
2438 Female, age 94, left hemisphere 6.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 27.4
Min nTPM: 7.8
Std nTPM: 3.6
Median nTPM: 13.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 27.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 23.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 23.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 22.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 22.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 22.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 22.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 21.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 21.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.9
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 20.7
Min nTPM: 13.4
Sample A Female 20.7
Sample B Female 15.0
Sample C Male 19.1
Sample D Male 13.4
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.5
Sample A Female 13.2
Sample B Female 17.4
Sample C Male 13.3
Sample D Male 12.5
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.8
Sample A Female 16.6
Sample B Female 12.8
Sample C Male 12.8
Sample D Male 12.9
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 16.5
Min nTPM: 11.3
Sample A Female 16.5
Sample B Female 13.8
Sample C Male 11.3
Sample D Male 15.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.7
Sample A Male 16.4
Sample B Male 16.1
Sample C Female 16.3
Sample D Female 13.7
Hippocampal formation
nTPM: 19.4
Samples: 4

Max nTPM: 20.4
Min nTPM: 17.4
Sample A Male 19.4
Sample B Male 20.4
Sample C Female 20.4
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
70565294 Antisense, RP_050623_04_F08, Mouse strain C57BL/6J (56 days, male) 1.0

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