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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:517.5 nTPM
HPA:517.5 nTPM
GTEx:973.4 nTPM
FANTOM5:805.2 Scaled Tags Per Million
Pig:1309.6 nTPM
Mouse:2168.3 nTPM
Allen mouse:25.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043245Antibody CAB012340
Glial cells Not detectedNot detected
Neuronal cells HighHigh




BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 517.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 428.3
2846 Female, age 79, unknown 636.4
1857 Female, age 85, left hemisphere 584.2
2290 Female, age 72, unknown 503.4
1854 Male, age 80, left hemisphere 456.1
1781 Male, age 74, unknown 388.9
2288 Male, age 75, left hemisphere 377.3
2289 Male, age 61, right hemisphere 267.9
2481 Female, age 94, left hemisphere 212.1
Claustrum
nTPM: 114.3
2196 Female, age 79, unknown 161.1
2284 Female, age 91, both hemispheres 130.9
2568 Male, age 61, both hemispheres 124.6
2198 Male, age 80, both hemispheres 121.9
2392 Female, age 94, both hemispheres 117.0
1956 Male, age 74, unknown 109.2
2491 Male, age 75, both hemispheres 107.4
2645 Female, age 72, unknown 89.6
2292 Female, age 85, both hemispheres 66.8
Globus pallidus, externus
nTPM: 67.6
2646 Male, age 61, right hemisphere 87.7
2395 Male, age 75, both hemispheres 81.3
2567 Female, age 72, unknown 57.9
2772 Female, age 79, unknown 57.6
1996 Male, age 80, right hemisphere 53.3
Globus pallidus, internus
nTPM: 60.7
2483 Female, age 94, right hemisphere 147.3
2566 Female, age 72, unknown 49.3
2037 Male, age 80, right hemisphere 48.1
2287 Male, age 75, right hemisphere 47.8
1818 Male, age 74, unknown 47.6
2778 Female, age 91, both hemispheres 43.2
2111 Female, age 85, right hemisphere 41.7
Nucleus accumbens
nTPM: 307.8
1856 Female, age 91, right hemisphere 480.9
1783 Male, age 74, unknown 467.1
1806 Female, age 85, left hemisphere 433.9
2286 Male, age 75, left hemisphere 296.8
2824 Male, age 61, right hemisphere 275.3
2698 Female, age 72, unknown 268.1
2391 Female, age 94, left hemisphere 153.4
2732 Male, age 80, right hemisphere 86.9
Nucleus basalis of Meynert
nTPM: 301.2
2393 Male, age 80, right hemisphere 446.1
2484 Female, age 94, left hemisphere 395.3
2821 Male, age 75, both hemispheres 245.7
2569 Male, age 61, both hemispheres 117.6
Nucleus of the diagonal band
nTPM: 99.6
1812 Female, age 91, both hemispheres 120.7
2775 Male, age 80, right hemisphere 115.3
2195 Female, age 85, both hemispheres 106.3
2029 Male, age 61, right hemisphere 103.7
1979 Male, age 74, unknown 52.0
Olfactory tubercle
nTPM: 96.6
2856 Male, age 75, right hemisphere 98.4
1846 Male, age 80, right hemisphere 98.3
2487 Female, age 94, left hemisphere 95.7
1998 Female, age 91, both hemispheres 94.2
Putamen
nTPM: 517.5
1829 Male, age 74, unknown 754.7
1838 Male, age 80, right hemisphere 605.2
2466 Female, age 79, unknown 594.5
2489 Female, age 72, unknown 520.6
1937 Female, age 91, right hemisphere 491.4
2647 Male, age 75, left hemisphere 390.9
2482 Female, age 94, left hemisphere 265.5
Septal nuclei
nTPM: 90.0
1960 Male, age 74, unknown 150.3
2031 Female, age 72, unknown 119.9
2629 Female, age 94, right hemisphere 98.6
2009 Female, age 91, both hemispheres 90.4
2059 Female, age 85, both hemispheres 76.4
2394 Male, age 61, left hemisphere 56.2
2199 Male, age 80, right hemisphere 38.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 973.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 885.8
Samples: 246

Max nTPM: 2107.4
Min nTPM: 28.8
Std nTPM: 467.5
Median nTPM: 910.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2107.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 2082.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2061.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2026.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1955.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1842.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1783.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1747.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1721.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1709.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1689.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1638.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1637.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1615.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1604.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1565.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1562.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1536.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1521.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1505.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1487.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1486.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1480.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1477.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1475.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1470.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1455.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1453.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1443.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1421.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1417.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1413.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1397.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1396.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1393.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1391.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1376.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1373.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1369.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1341.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1337.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1328.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1324.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1321.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1321.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1316.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1315.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1312.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1307.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1295.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1293.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1292.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1285.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1284.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1283.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1271.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1265.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1260.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1259.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1257.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1249.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1240.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1236.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1229.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1222.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1220.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1209.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1196.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1193.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1192.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1188.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1173.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1173.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1173.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1170.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1166.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1163.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1153.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1153.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1147.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1142.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1133.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1124.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1119.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1117.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1105.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1087.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1085.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1080.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1080.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1069.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1061.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1061.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1049.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1049.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1046.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1044.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1042.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1037.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1020.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1010.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1008.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1000.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 996.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 995.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 981.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 981.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 977.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 974.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 973.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 970.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 967.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 960.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 957.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 956.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 948.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 945.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 938.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 935.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 921.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 913.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 912.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 911.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 909.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 902.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 899.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 895.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 885.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 871.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 861.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 857.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 854.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 848.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 842.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 841.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 825.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 825.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 797.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 796.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 790.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 783.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 779.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 769.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 768.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 760.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 758.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 757.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 752.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 750.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 746.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 737.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 726.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 717.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 716.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 714.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 713.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 707.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 694.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 693.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 686.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 681.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 668.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 667.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 659.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 659.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 655.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 652.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 647.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 646.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 645.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 637.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 632.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 603.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 590.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 567.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 566.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 540.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 534.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 515.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 514.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 514.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 511.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 506.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 500.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 499.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 493.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 486.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 478.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 469.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 461.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 455.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 443.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 429.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 404.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 400.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 389.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 381.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 369.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 362.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 361.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 353.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 343.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 341.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 332.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 329.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 324.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 322.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 317.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 316.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 316.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 303.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 295.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 295.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 290.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 288.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 288.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 287.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 281.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 275.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 274.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 260.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 252.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 251.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 247.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 246.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 242.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 228.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 213.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 212.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 199.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 188.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 185.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 183.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 162.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 156.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 155.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 140.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 134.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 130.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 124.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 109.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 88.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 86.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 70.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 28.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 561.5
Samples: 246

Max nTPM: 1737.4
Min nTPM: 6.5
Std nTPM: 307.9
Median nTPM: 563.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1737.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1662.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1500.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1333.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1238.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1215.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1198.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1168.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1164.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1146.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1144.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1108.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1082.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1074.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1066.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1024.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1011.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 983.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 971.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 969.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 953.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 949.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 948.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 946.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 938.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 934.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 924.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 913.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 912.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 908.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 908.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 906.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 894.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 885.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 875.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 873.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 867.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 865.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 857.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 854.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 850.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 834.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 829.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 817.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 817.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 803.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 797.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 793.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 791.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 791.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 785.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 778.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 778.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 772.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 768.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 760.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 751.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 736.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 734.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 733.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 731.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 730.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 729.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 725.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 721.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 714.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 711.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 706.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 705.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 701.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 697.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 696.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 694.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 694.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 693.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 687.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 687.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 687.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 686.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 685.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 682.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 681.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 680.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 677.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 677.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 665.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 664.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 662.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 649.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 645.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 639.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 639.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 632.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 630.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 629.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 620.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 620.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 620.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 618.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 617.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 617.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 608.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 607.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 606.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 604.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 604.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 599.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 597.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 595.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 592.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 591.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 591.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 591.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 590.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 590.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 589.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 586.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 586.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 583.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 574.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 571.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 565.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 565.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 560.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 560.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 559.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 558.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 556.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 555.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 549.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 542.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 540.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 540.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 539.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 538.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 538.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 536.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 536.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 535.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 529.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 524.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 519.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 519.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 518.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 518.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 515.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 511.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 511.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 497.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 492.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 491.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 488.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 482.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 482.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 479.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 477.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 464.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 460.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 459.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 451.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 450.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 447.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 447.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 444.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 441.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 440.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 436.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 430.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 423.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 418.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 413.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 402.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 396.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 385.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 384.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 384.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 383.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 375.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 371.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 367.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 364.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 351.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 349.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 344.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 335.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 331.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 325.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 324.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 319.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 312.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 311.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 299.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 296.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 291.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 290.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 286.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 276.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 267.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 260.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 259.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 250.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 241.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 239.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 237.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 235.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 234.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 233.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 233.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 230.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 228.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 224.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 224.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 219.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 209.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 189.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 187.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 185.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 176.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 169.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 161.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 153.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 138.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 136.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 136.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 134.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 128.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 124.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 120.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 114.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 98.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 84.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 59.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 59.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 59.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 56.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 44.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 40.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 38.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 37.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 29.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 23.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 20.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 19.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 6.5
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Brain - Putamen (basal ganglia)
Average nTPM: 973.4
Samples: 205

Max nTPM: 2378.9
Min nTPM: 53.6
Std nTPM: 538.0
Median nTPM: 958.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2378.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2337.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2308.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 2024.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2002.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1997.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1951.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1897.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1869.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1860.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1846.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1836.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1835.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1782.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1746.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1736.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1730.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1726.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1722.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1714.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1696.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1691.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1684.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1677.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1636.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1628.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1626.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1620.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1595.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1584.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1572.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1527.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1526.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1524.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1506.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1494.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1490.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1489.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1483.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1473.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1470.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1467.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1463.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1452.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1448.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1445.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1444.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1436.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1423.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1422.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1415.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 1378.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1371.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1362.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1353.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1351.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1346.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1340.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1339.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1304.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1293.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1274.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1241.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1241.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1235.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1232.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1216.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1187.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1186.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1184.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1180.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1170.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1154.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1145.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1144.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1143.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1142.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1141.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1140.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1136.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1134.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1131.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1121.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1113.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1110.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1102.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1097.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1082.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1073.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1063.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1061.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1058.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1056.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1053.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1045.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1044.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1043.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1042.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1041.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1015.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1011.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 994.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 958.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 956.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 953.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 948.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 945.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 938.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 936.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 934.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 931.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 923.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 911.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 908.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 896.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 893.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 891.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 874.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 872.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 866.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 864.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 862.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 860.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 828.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 815.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 808.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 800.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 775.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 774.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 771.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 770.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 762.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 758.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 749.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 742.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 740.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 738.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 707.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 701.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 695.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 658.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 658.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 655.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 638.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 610.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 602.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 579.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 567.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 562.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 560.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 525.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 505.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 490.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 488.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 482.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 470.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 462.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 458.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 453.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 444.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 422.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 419.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 417.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 406.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 393.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 373.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 372.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 362.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 362.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 354.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 350.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 346.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 334.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 327.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 314.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 308.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 305.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 301.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 294.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 281.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 280.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 278.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 273.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 229.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 228.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 224.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 220.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 219.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 211.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 203.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 203.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 189.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 173.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 168.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 168.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 165.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 161.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 138.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 136.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 134.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 117.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 76.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 74.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 62.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 53.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 805.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 379.0
FF:10164-103B2 76 years, female 379.0
Globus pallidus
Scaled Tags Per Million: 390.9
FF:10175-103C4 60 years, female 728.5
FF:10161-103A8 76 years, female 53.3
Nucleus accumbens
Scaled Tags Per Million: 805.2
FF:10037-101F1 23-56 years, mixed 805.2
Putamen
Scaled Tags Per Million: 768.5
FF:10176-103C5 60 years, female 768.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 1309.6
Pig sample Sample description nTPM
Caudate
nTPM: 1071.3
Samples: 4

Max nTPM: 1535.3
Min nTPM: 737.1
Sample A Female 737.1
Sample B Female 1028.4
Sample C Male 1535.3
Sample D Male 984.2
Putamen
nTPM: 1309.6
Samples: 4

Max nTPM: 2306.3
Min nTPM: 327.8
Sample A Female 327.8
Sample B Female 1237.9
Sample C Male 2306.3
Sample D Male 1366.4
Septum
nTPM: 192.4
Samples: 4

Max nTPM: 407.6
Min nTPM: 22.9
Sample A Female 296.6
Sample B Female 407.6
Sample C Male 22.9
Sample D Male 42.4
Ventral pallidum
nTPM: 464.5
Samples: 4

Max nTPM: 638.0
Min nTPM: 118.6
Sample A Female 600.1
Sample B Female 638.0
Sample C Male 118.6
Sample D Male 501.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2168.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2168.3
Samples: 4

Max nTPM: 2787.6
Min nTPM: 1669.3
Sample A Male 2400.1
Sample B Male 2787.6
Sample C Female 1669.3
Sample D Female 1816.2
Septum
nTPM: 382.3
Samples: 4

Max nTPM: 422.9
Min nTPM: 355.7
Sample A Male 380.5
Sample B Male 422.9
Sample C Female 355.7
Sample D Female 369.9
Ventral forebrain
nTPM: 919.6
Samples: 4

Max nTPM: 1013.4
Min nTPM: 803.3
Sample A Male 1013.4
Sample B Male 803.3
Sample C Female 996.3
Sample D Female 865.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 25.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 25.1
72129291 Antisense, RP_051017_03_F07, Mouse strain C57BL/6J (56 days, male) 26.6
75750508 Antisense, RP_060518_04_H10, Mouse strain C57BL/6J (56 days, male) 23.6
Pallidum
Expression energy: 13.5
75750508 Antisense, RP_060518_04_H10, Mouse strain C57BL/6J (56 days, male) 14.9
72129291 Antisense, RP_051017_03_F07, Mouse strain C57BL/6J (56 days, male) 12.1

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