HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:48.6 nTPM
HPA:48.6 nTPM
GTEx:41.5 nTPM
FANTOM5:82.8 Scaled Tags Per Million
Pig:46.8 nTPM
Mouse:107.0 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028024
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.6
Sample id Sample description nTPM
Hippocampus
nTPM: 45.8
1898 Male, age 80, left hemisphere 49.9
1855 Male, age 76, left hemisphere 46.6
2621 Female, age 67, right hemisphere 45.7
2529 Female, age 94, left hemisphere 44.7
1911 Female, age 85, right hemisphere 44.4
2148 Female, age 91, left hemisphere 43.5
Dentate gyrus
nTPM: 47.4
2530 Female, age 94, left hemisphere 50.5
2010 Male, age 76, both hemispheres 49.8
2528 Male, age 74, both hemispheres 49.2
1927 Female, age 91, both hemispheres 47.4
2246 Female, age 85, both hemispheres 44.9
2531 Female, age 67, both hemispheres 42.4
Entorhinal gyrus
nTPM: 45.1
2764 Male, age 80, right hemisphere 48.9
2117 Female, age 91, right hemisphere 47.3
1787 Male, age 76, left hemisphere 47.1
1938 Female, age 85, left hemisphere 46.4
2613 Female, age 94, left hemisphere 40.7
2686 Male, age 75, right hemisphere 40.1
Hippocampus, CA1
nTPM: 46.8
2749 Male, age 80, left hemisphere 50.6
2527 Male, age 74, both hemispheres 48.1
1873 Female, age 85, both hemispheres 46.4
2045 Male, age 76, both hemispheres 44.8
2082 Female, age 91, right hemisphere 43.9
Hippocampus, CA2
nTPM: 48.2
1892 Male, age 76, both hemispheres 54.3
2249 Male, age 74, both hemispheres 52.1
1963 Male, age 80, left hemisphere 51.9
2437 Female, age 94, left hemisphere 45.2
1940 Female, age 85, left hemisphere 44.7
2113 Female, age 91, right hemisphere 40.9
Hippocampus, CA3
nTPM: 46.0
2436 Male, age 74, both hemispheres 51.2
1867 Male, age 76, both hemispheres 47.5
2137 Male, age 80, left hemisphere 47.5
2620 Female, age 94, left hemisphere 45.6
1891 Female, age 85, both hemispheres 45.3
2861 Female, age 67, both hemispheres 39.0
Parahippocampal cortex
nTPM: 45.4
1850 Male, age 80, both hemispheres 49.7
2250 Female, age 67, right hemisphere 49.0
2693 Female, age 94, both hemispheres 49.0
1990 Female, age 91, right hemisphere 47.4
2245 Female, age 91, both hemispheres 46.0
2532 Female, age 72, left hemisphere 45.2
2018 Male, age 76, both hemispheres 43.1
1933 Female, age 85, both hemispheres 42.7
2622 Female, age 67, right hemisphere 41.0
2692 Male, age 74, both hemispheres 40.6
Perirhinal gyrus
nTPM: 48.6
1794 Male, age 80, right hemisphere 50.3
1841 Female, age 85, right hemisphere 49.0
2521 Female, age 94, right hemisphere 48.6
1847 Female, age 91, left hemisphere 48.5
2848 Male, age 76, right hemisphere 46.8
Subiculum
nTPM: 45.4
1977 Female, age 85, both hemispheres 48.6
2438 Female, age 94, left hemisphere 46.0
1901 Male, age 80, both hemispheres 45.8
2729 Female, age 91, right hemisphere 44.2
2619 Male, age 74, both hemispheres 44.0
2042 Male, age 76, both hemispheres 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.5
Samples: 197

Max nTPM: 69.9
Min nTPM: 24.0
Std nTPM: 8.1
Median nTPM: 39.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 69.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 69.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 67.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 67.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 66.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 59.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 58.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 58.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 57.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 55.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 55.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.8
FF:10169-103B7 60 years, female 92.0
FF:10153-102I9 76 years, female 73.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.7
Samples: 4

Max nTPM: 51.4
Min nTPM: 38.1
Sample A Female 51.4
Sample B Female 47.7
Sample C Male 49.6
Sample D Male 38.1
Entorhinal cortex
nTPM: 46.8
Samples: 4

Max nTPM: 49.7
Min nTPM: 40.6
Sample A Female 48.7
Sample B Female 49.7
Sample C Male 48.3
Sample D Male 40.6
Subiculum
nTPM: 46.6
Samples: 4

Max nTPM: 55.4
Min nTPM: 41.6
Sample A Female 55.4
Sample B Female 45.3
Sample C Male 43.9
Sample D Male 41.6
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 51.4
Min nTPM: 37.9
Sample A Female 44.1
Sample B Female 37.9
Sample C Male 51.4
Sample D Male 44.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.1
Samples: 4

Max nTPM: 126.7
Min nTPM: 92.2
Sample A Male 103.1
Sample B Male 92.2
Sample C Female 106.2
Sample D Female 126.7
Hippocampal formation
nTPM: 99.3
Samples: 4

Max nTPM: 106.2
Min nTPM: 90.5
Sample A Male 100.3
Sample B Male 90.5
Sample C Female 106.2
Sample D Female 100.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
1689 Antisense, RP_040604_01_F11, Mouse strain C57BL/6J (56 days, male) 7.2
1690 Antisense, RP_040604_01_F11, Mouse strain C57BL/6J (56 days, male) 4.2

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