COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.8 nTPM
HPA:51.8 nTPM
GTEx:51.5 nTPM
FANTOM5:154.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA009025Antibody HPA024565
Endothelial cells HighLow
Glandular cells HighLow
Peripheral nerve/ganglion HighNot detected





COLON - HPA RNA-seqi
Average nTPM 51.8
overview
Male, age 54 		Colon sample 67
nTPM: 30
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 22.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 65.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 88
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 22.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 59.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 69.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 37.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 38.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 76.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 40.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 64.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 59
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 51.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 42.5
Samples: 373

Max nTPM: 123.0
Min nTPM: 11.7
Std nTPM: 12.6
Median nTPM: 41.2
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 123.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 85.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 80.5
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 77.4
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 75.3
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 72.9
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 72.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 71.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 70.7
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 69.7
GTEX-1OFPY-1226-SM-E76OM 60-69 years, male 69.4
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Colon - Transverse
Average nTPM: 51.5
Samples: 406

Max nTPM: 292.9
Min nTPM: 17.8
Std nTPM: 21.6
Median nTPM: 47.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 292.9
GTEX-1LGOU-1626-SM-D3LAK 20-29 years, female 190.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 146.1
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 113.0
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 112.9
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 109.6
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 104.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 102.7
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 94.8
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 94.2
GTEX-1JN76-1226-SM-C1YRM 20-29 years, female 90.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 154.7
FF:10014-101C5 62,83,84 years, mixed 154.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.