HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.4 nTPM
HPA:20.4 nTPM
GTEx:42.4 nTPM
FANTOM5:86.7 Scaled Tags Per Million
Pig:31.1 nTPM
Mouse:94.0 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040716
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 16.9
2621 Female, age 67, right hemisphere 30.8
2529 Female, age 94, left hemisphere 23.6
2148 Female, age 91, left hemisphere 15.4
1911 Female, age 85, right hemisphere 14.1
1855 Male, age 76, left hemisphere 11.1
1898 Male, age 80, left hemisphere 6.5
Dentate gyrus
nTPM: 11.4
2531 Female, age 67, both hemispheres 23.2
1927 Female, age 91, both hemispheres 14.7
2530 Female, age 94, left hemisphere 9.6
2528 Male, age 74, both hemispheres 8.1
2246 Female, age 85, both hemispheres 7.4
2010 Male, age 76, both hemispheres 5.4
Entorhinal gyrus
nTPM: 20.1
2613 Female, age 94, left hemisphere 45.3
2764 Male, age 80, right hemisphere 19.7
2686 Male, age 75, right hemisphere 17.6
1787 Male, age 76, left hemisphere 15.6
1938 Female, age 85, left hemisphere 13.0
2117 Female, age 91, right hemisphere 9.4
Hippocampus, CA1
nTPM: 14.3
2749 Male, age 80, left hemisphere 21.9
2527 Male, age 74, both hemispheres 18.9
2082 Female, age 91, right hemisphere 14.3
2045 Male, age 76, both hemispheres 10.3
1873 Female, age 85, both hemispheres 6.1
Hippocampus, CA2
nTPM: 11.7
2113 Female, age 91, right hemisphere 17.8
1963 Male, age 80, left hemisphere 15.5
2437 Female, age 94, left hemisphere 11.0
1940 Female, age 85, left hemisphere 10.1
1892 Male, age 76, both hemispheres 9.5
2249 Male, age 74, both hemispheres 6.5
Hippocampus, CA3
nTPM: 15.9
2861 Female, age 67, both hemispheres 28.9
2137 Male, age 80, left hemisphere 27.1
2620 Female, age 94, left hemisphere 21.9
1867 Male, age 76, both hemispheres 8.8
1891 Female, age 85, both hemispheres 4.9
2436 Male, age 74, both hemispheres 3.5
Parahippocampal cortex
nTPM: 18.2
2245 Female, age 91, both hemispheres 34.8
2622 Female, age 67, right hemisphere 31.4
2693 Female, age 94, both hemispheres 20.1
2532 Female, age 72, left hemisphere 17.2
2250 Female, age 67, right hemisphere 15.5
2692 Male, age 74, both hemispheres 14.5
2018 Male, age 76, both hemispheres 13.8
1850 Male, age 80, both hemispheres 11.9
1990 Female, age 91, right hemisphere 11.9
1933 Female, age 85, both hemispheres 11.3
Perirhinal gyrus
nTPM: 20.4
2521 Female, age 94, right hemisphere 34.0
1794 Male, age 80, right hemisphere 20.6
1841 Female, age 85, right hemisphere 16.9
1847 Female, age 91, left hemisphere 16.5
2848 Male, age 76, right hemisphere 14.2
Subiculum
nTPM: 9.6
2619 Male, age 74, both hemispheres 14.4
2042 Male, age 76, both hemispheres 11.0
1901 Male, age 80, both hemispheres 10.3
2438 Female, age 94, left hemisphere 9.1
1977 Female, age 85, both hemispheres 7.1
2729 Female, age 91, right hemisphere 5.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.4
Samples: 197

Max nTPM: 182.1
Min nTPM: 15.4
Std nTPM: 21.8
Median nTPM: 35.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 182.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 112.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 106.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 101.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 100.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 99.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 94.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 89.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 89.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 86.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 86.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.7
FF:10153-102I9 76 years, female 92.8
FF:10169-103B7 60 years, female 80.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 27.0
Min nTPM: 18.2
Sample A Female 27.0
Sample B Female 23.7
Sample C Male 24.7
Sample D Male 18.2
Entorhinal cortex
nTPM: 31.1
Samples: 4

Max nTPM: 36.8
Min nTPM: 26.7
Sample A Female 31.1
Sample B Female 26.7
Sample C Male 36.8
Sample D Male 29.9
Subiculum
nTPM: 30.0
Samples: 4

Max nTPM: 39.9
Min nTPM: 23.7
Sample A Female 39.9
Sample B Female 26.7
Sample C Male 29.6
Sample D Male 23.7
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 39.5
Min nTPM: 19.2
Sample A Female 22.1
Sample B Female 19.2
Sample C Male 39.5
Sample D Male 24.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.0
Samples: 4

Max nTPM: 104.3
Min nTPM: 80.4
Sample A Male 104.3
Sample B Male 97.3
Sample C Female 80.4
Sample D Female 94.1
Hippocampal formation
nTPM: 73.8
Samples: 4

Max nTPM: 79.6
Min nTPM: 68.8
Sample A Male 71.6
Sample B Male 75.1
Sample C Female 68.8
Sample D Female 79.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
100143454 Antisense, RP_110407_01_C08, Mouse strain C57BL/6J (56 days, male) 10.0

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