HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:344.1 nTPM
HPA:344.1 nTPM
GTEx:308.5 nTPM
FANTOM5:514.9 Scaled Tags Per Million
Pig:178.0 nTPM
Mouse:408.3 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023309Antibody HPA029524
Glial cells LowHigh
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 344.1
Sample id Sample description nTPM
Hippocampus
nTPM: 331.2
1898 Male, age 80, left hemisphere 343.8
1911 Female, age 85, right hemisphere 340.0
2529 Female, age 94, left hemisphere 336.9
1855 Male, age 76, left hemisphere 326.5
2621 Female, age 67, right hemisphere 322.9
2148 Female, age 91, left hemisphere 316.8
Dentate gyrus
nTPM: 326.8
2010 Male, age 76, both hemispheres 355.0
2530 Female, age 94, left hemisphere 333.3
1927 Female, age 91, both hemispheres 323.8
2246 Female, age 85, both hemispheres 318.5
2528 Male, age 74, both hemispheres 316.0
2531 Female, age 67, both hemispheres 314.4
Entorhinal gyrus
nTPM: 341.7
2117 Female, age 91, right hemisphere 357.5
2686 Male, age 75, right hemisphere 352.3
1938 Female, age 85, left hemisphere 346.7
2613 Female, age 94, left hemisphere 338.7
1787 Male, age 76, left hemisphere 330.6
2764 Male, age 80, right hemisphere 324.5
Hippocampus, CA1
nTPM: 322.4
2527 Male, age 74, both hemispheres 326.2
2749 Male, age 80, left hemisphere 326.0
1873 Female, age 85, both hemispheres 325.6
2082 Female, age 91, right hemisphere 322.1
2045 Male, age 76, both hemispheres 312.3
Hippocampus, CA2
nTPM: 329.1
1963 Male, age 80, left hemisphere 339.1
1892 Male, age 76, both hemispheres 336.9
2437 Female, age 94, left hemisphere 325.5
1940 Female, age 85, left hemisphere 325.4
2113 Female, age 91, right hemisphere 324.2
2249 Male, age 74, both hemispheres 323.4
Hippocampus, CA3
nTPM: 323.5
1867 Male, age 76, both hemispheres 352.8
1891 Female, age 85, both hemispheres 348.6
2137 Male, age 80, left hemisphere 325.1
2436 Male, age 74, both hemispheres 312.2
2861 Female, age 67, both hemispheres 308.3
2620 Female, age 94, left hemisphere 293.7
Parahippocampal cortex
nTPM: 344.1
2532 Female, age 72, left hemisphere 361.7
1850 Male, age 80, both hemispheres 357.4
2692 Male, age 74, both hemispheres 354.8
1990 Female, age 91, right hemisphere 352.0
1933 Female, age 85, both hemispheres 346.3
2018 Male, age 76, both hemispheres 339.5
2622 Female, age 67, right hemisphere 338.3
2693 Female, age 94, both hemispheres 334.1
2245 Female, age 91, both hemispheres 330.7
2250 Female, age 67, right hemisphere 326.1
Perirhinal gyrus
nTPM: 342.3
1841 Female, age 85, right hemisphere 347.9
2521 Female, age 94, right hemisphere 346.6
1847 Female, age 91, left hemisphere 344.7
2848 Male, age 76, right hemisphere 337.4
1794 Male, age 80, right hemisphere 334.9
Subiculum
nTPM: 341.8
1901 Male, age 80, both hemispheres 354.3
2438 Female, age 94, left hemisphere 351.2
2042 Male, age 76, both hemispheres 344.1
1977 Female, age 85, both hemispheres 340.6
2619 Male, age 74, both hemispheres 337.6
2729 Female, age 91, right hemisphere 322.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 308.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 308.5
Samples: 197

Max nTPM: 751.5
Min nTPM: 118.7
Std nTPM: 108.3
Median nTPM: 291.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 751.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 716.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 697.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 668.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 641.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 569.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 567.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 557.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 535.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 529.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 496.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 514.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 514.9
FF:10153-102I9 76 years, female 547.5
FF:10169-103B7 60 years, female 482.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 178.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 178.0
Samples: 4

Max nTPM: 235.3
Min nTPM: 109.1
Sample A Female 235.3
Sample B Female 152.7
Sample C Male 214.9
Sample D Male 109.1
Entorhinal cortex
nTPM: 160.8
Samples: 4

Max nTPM: 203.2
Min nTPM: 139.8
Sample A Female 148.0
Sample B Female 203.2
Sample C Male 152.0
Sample D Male 139.8
Subiculum
nTPM: 147.3
Samples: 4

Max nTPM: 182.8
Min nTPM: 120.7
Sample A Female 182.8
Sample B Female 135.1
Sample C Male 120.7
Sample D Male 150.6
Ventral hippocampus
nTPM: 133.5
Samples: 4

Max nTPM: 158.7
Min nTPM: 107.3
Sample A Female 154.2
Sample B Female 113.9
Sample C Male 107.3
Sample D Male 158.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 408.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 408.3
Samples: 4

Max nTPM: 459.8
Min nTPM: 372.6
Sample A Male 399.0
Sample B Male 459.8
Sample C Female 401.6
Sample D Female 372.6
Hippocampal formation
nTPM: 333.8
Samples: 4

Max nTPM: 403.6
Min nTPM: 299.8
Sample A Male 403.6
Sample B Male 299.8
Sample C Female 310.0
Sample D Female 321.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
961 Antisense, RP_Baylor_103391, Mouse strain C57BL/6J (56 days, male) 2.8
962 Antisense, RP_Baylor_103391, Mouse strain C57BL/6J (56 days, male) 1.9

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