HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:11.0 nTPM
FANTOM5:57.9 Scaled Tags Per Million
Pig:35.2 nTPM
Mouse:29.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015630
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
1911 Female, age 85, right hemisphere 16.8
2529 Female, age 94, left hemisphere 16.2
2621 Female, age 67, right hemisphere 15.5
1855 Male, age 76, left hemisphere 15.4
2148 Female, age 91, left hemisphere 14.4
1898 Male, age 80, left hemisphere 14.3
Dentate gyrus
nTPM: 14.0
2528 Male, age 74, both hemispheres 15.0
2010 Male, age 76, both hemispheres 14.6
1927 Female, age 91, both hemispheres 14.2
2246 Female, age 85, both hemispheres 14.0
2530 Female, age 94, left hemisphere 13.2
2531 Female, age 67, both hemispheres 12.8
Entorhinal gyrus
nTPM: 16.2
2117 Female, age 91, right hemisphere 17.8
1938 Female, age 85, left hemisphere 16.7
1787 Male, age 76, left hemisphere 16.2
2613 Female, age 94, left hemisphere 16.1
2764 Male, age 80, right hemisphere 15.5
2686 Male, age 75, right hemisphere 14.8
Hippocampus, CA1
nTPM: 14.8
2527 Male, age 74, both hemispheres 15.7
2082 Female, age 91, right hemisphere 15.4
2749 Male, age 80, left hemisphere 15.1
1873 Female, age 85, both hemispheres 14.4
2045 Male, age 76, both hemispheres 13.3
Hippocampus, CA2
nTPM: 15.4
2113 Female, age 91, right hemisphere 16.6
2249 Male, age 74, both hemispheres 16.3
1963 Male, age 80, left hemisphere 15.5
1892 Male, age 76, both hemispheres 15.3
2437 Female, age 94, left hemisphere 14.4
1940 Female, age 85, left hemisphere 14.0
Hippocampus, CA3
nTPM: 14.4
1891 Female, age 85, both hemispheres 15.8
2436 Male, age 74, both hemispheres 15.4
2137 Male, age 80, left hemisphere 15.3
1867 Male, age 76, both hemispheres 14.1
2861 Female, age 67, both hemispheres 13.1
2620 Female, age 94, left hemisphere 13.0
Parahippocampal cortex
nTPM: 16.1
2692 Male, age 74, both hemispheres 18.2
1933 Female, age 85, both hemispheres 16.7
2245 Female, age 91, both hemispheres 16.7
2622 Female, age 67, right hemisphere 16.4
2532 Female, age 72, left hemisphere 16.2
2250 Female, age 67, right hemisphere 16.0
1990 Female, age 91, right hemisphere 15.9
2018 Male, age 76, both hemispheres 15.8
2693 Female, age 94, both hemispheres 14.7
1850 Male, age 80, both hemispheres 14.4
Perirhinal gyrus
nTPM: 15.5
1847 Female, age 91, left hemisphere 15.9
1794 Male, age 80, right hemisphere 15.8
1841 Female, age 85, right hemisphere 15.6
2848 Male, age 76, right hemisphere 15.6
2521 Female, age 94, right hemisphere 14.6
Subiculum
nTPM: 16.4
2619 Male, age 74, both hemispheres 17.3
2438 Female, age 94, left hemisphere 17.0
2042 Male, age 76, both hemispheres 16.8
1977 Female, age 85, both hemispheres 16.1
2729 Female, age 91, right hemisphere 15.7
1901 Male, age 80, both hemispheres 15.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.0
Samples: 197

Max nTPM: 17.3
Min nTPM: 6.7
Std nTPM: 1.8
Median nTPM: 10.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 17.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 16.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 15.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 15.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 14.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 14.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 14.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 14.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 14.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 14.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 14.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.9
FF:10153-102I9 76 years, female 58.3
FF:10169-103B7 60 years, female 57.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.2
Samples: 4

Max nTPM: 44.5
Min nTPM: 24.6
Sample A Female 44.5
Sample B Female 30.0
Sample C Male 41.6
Sample D Male 24.6
Entorhinal cortex
nTPM: 27.4
Samples: 4

Max nTPM: 29.0
Min nTPM: 24.3
Sample A Female 29.0
Sample B Female 27.5
Sample C Male 28.6
Sample D Male 24.3
Subiculum
nTPM: 30.8
Samples: 4

Max nTPM: 37.9
Min nTPM: 27.2
Sample A Female 37.9
Sample B Female 28.0
Sample C Male 27.2
Sample D Male 29.9
Ventral hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 35.0
Min nTPM: 25.1
Sample A Female 30.7
Sample B Female 25.1
Sample C Male 31.8
Sample D Male 35.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 31.7
Min nTPM: 28.6
Sample A Male 30.3
Sample B Male 31.7
Sample C Female 28.6
Sample D Female 28.8
Hippocampal formation
nTPM: 28.4
Samples: 4

Max nTPM: 29.8
Min nTPM: 26.1
Sample A Male 28.9
Sample B Male 28.8
Sample C Female 29.8
Sample D Female 26.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68196928 Antisense, RP_041116_01_F07, Mouse strain C57BL/6J (56 days, male) 0.1

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