HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:99.7 nTPM
HPA:99.7 nTPM
GTEx:351.6 nTPM
FANTOM5:700.9 Scaled Tags Per Million
Pig:155.1 nTPM
Mouse:410.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001666Antibody CAB012403
Glial cells LowHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.7
Sample id Sample description nTPM
Hippocampus
nTPM: 98.3
1911 Female, age 85, right hemisphere 101.7
2529 Female, age 94, left hemisphere 101.2
1855 Male, age 76, left hemisphere 97.1
1898 Male, age 80, left hemisphere 97.0
2621 Female, age 67, right hemisphere 97.0
2148 Female, age 91, left hemisphere 95.7
Dentate gyrus
nTPM: 98.5
2530 Female, age 94, left hemisphere 104.8
2246 Female, age 85, both hemispheres 100.0
2531 Female, age 67, both hemispheres 98.5
2528 Male, age 74, both hemispheres 98.2
1927 Female, age 91, both hemispheres 96.6
2010 Male, age 76, both hemispheres 92.9
Entorhinal gyrus
nTPM: 97.2
2117 Female, age 91, right hemisphere 99.8
1938 Female, age 85, left hemisphere 98.8
2686 Male, age 75, right hemisphere 97.7
2613 Female, age 94, left hemisphere 96.0
1787 Male, age 76, left hemisphere 95.9
2764 Male, age 80, right hemisphere 94.9
Hippocampus, CA1
nTPM: 97.9
2527 Male, age 74, both hemispheres 101.7
1873 Female, age 85, both hemispheres 100.9
2749 Male, age 80, left hemisphere 97.3
2082 Female, age 91, right hemisphere 97.2
2045 Male, age 76, both hemispheres 92.5
Hippocampus, CA2
nTPM: 97.6
1940 Female, age 85, left hemisphere 100.6
2249 Male, age 74, both hemispheres 99.9
2113 Female, age 91, right hemisphere 98.4
2437 Female, age 94, left hemisphere 97.7
1892 Male, age 76, both hemispheres 94.7
1963 Male, age 80, left hemisphere 94.3
Hippocampus, CA3
nTPM: 98.4
1891 Female, age 85, both hemispheres 103.8
2436 Male, age 74, both hemispheres 99.8
2137 Male, age 80, left hemisphere 99.3
1867 Male, age 76, both hemispheres 98.9
2861 Female, age 67, both hemispheres 94.4
2620 Female, age 94, left hemisphere 94.3
Parahippocampal cortex
nTPM: 97.3
2245 Female, age 91, both hemispheres 100.1
1850 Male, age 80, both hemispheres 99.5
1990 Female, age 91, right hemisphere 99.4
2692 Male, age 74, both hemispheres 99.2
1933 Female, age 85, both hemispheres 98.7
2532 Female, age 72, left hemisphere 98.7
2250 Female, age 67, right hemisphere 98.1
2622 Female, age 67, right hemisphere 93.8
2018 Male, age 76, both hemispheres 93.2
2693 Female, age 94, both hemispheres 91.9
Perirhinal gyrus
nTPM: 97.3
2521 Female, age 94, right hemisphere 99.0
1841 Female, age 85, right hemisphere 98.6
2848 Male, age 76, right hemisphere 97.9
1847 Female, age 91, left hemisphere 95.7
1794 Male, age 80, right hemisphere 95.1
Subiculum
nTPM: 99.7
2438 Female, age 94, left hemisphere 105.2
1901 Male, age 80, both hemispheres 101.6
1977 Female, age 85, both hemispheres 98.8
2619 Male, age 74, both hemispheres 98.2
2042 Male, age 76, both hemispheres 98.0
2729 Female, age 91, right hemisphere 96.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 351.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 351.6
Samples: 197

Max nTPM: 655.1
Min nTPM: 239.8
Std nTPM: 58.3
Median nTPM: 345.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 655.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 550.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 516.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 509.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 487.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 487.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 485.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 484.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 481.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 479.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 461.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 700.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 700.9
FF:10153-102I9 76 years, female 796.0
FF:10169-103B7 60 years, female 605.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 155.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 155.1
Samples: 4

Max nTPM: 170.6
Min nTPM: 134.5
Sample A Female 160.2
Sample B Female 134.5
Sample C Male 170.6
Sample D Male 155.0
Entorhinal cortex
nTPM: 140.9
Samples: 4

Max nTPM: 153.7
Min nTPM: 128.8
Sample A Female 135.0
Sample B Female 153.7
Sample C Male 128.8
Sample D Male 146.2
Subiculum
nTPM: 153.5
Samples: 4

Max nTPM: 170.1
Min nTPM: 143.9
Sample A Female 170.1
Sample B Female 145.0
Sample C Male 143.9
Sample D Male 154.8
Ventral hippocampus
nTPM: 140.1
Samples: 4

Max nTPM: 160.4
Min nTPM: 127.0
Sample A Female 135.5
Sample B Female 137.3
Sample C Male 127.0
Sample D Male 160.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 410.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 367.2
Samples: 4

Max nTPM: 375.5
Min nTPM: 357.4
Sample A Male 357.4
Sample B Male 375.5
Sample C Female 373.1
Sample D Female 362.6
Hippocampal formation
nTPM: 410.1
Samples: 4

Max nTPM: 424.4
Min nTPM: 397.2
Sample A Male 397.2
Sample B Male 424.4
Sample C Female 411.4
Sample D Female 407.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71232819 Antisense, RP_050503_02_A04, Mouse strain C57BL/6J (56 days, male) 0.0

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