PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:151.4 nTPM
HPA:151.4 nTPM
FANTOM5:400.2 Scaled Tags Per Million
Pig:101.4 nTPM
Mouse:291.7 nTPM
Allen mouse:9.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 151.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 133.8
2301 Female, age 85, both hemispheres 137.9
2090 Male, age 80, both hemispheres 136.8
2188 Female, age 91, both hemispheres 134.5
1984 Male, age 76, both hemispheres 126.0
Area postrema
nTPM: 121.8
2306 Male, age 80, both hemispheres 125.5
2799 Male, age 61, both hemispheres 121.9
2054 Male, age 76, both hemispheres 117.9
Cuneate nuclei
nTPM: 131.1
2131 Male, age 76, both hemispheres 135.7
2381 Male, age 80, both hemispheres 130.8
2376 Male, age 61, both hemispheres 126.8
Dorsal cochlear nucleus
nTPM: 128.7
2187 Female, age 91, both hemispheres 137.2
2802 Male, age 74, right hemisphere 134.4
2058 Male, age 76, both hemispheres 128.9
2370 Male, age 61, both hemispheres 123.4
2378 Male, age 80, both hemispheres 119.8
Dorsal medullary reticular nucleus
nTPM: 132.6
2040 Female, age 85, both hemispheres 144.1
2373 Male, age 61, both hemispheres 127.9
2088 Male, age 76, both hemispheres 125.8
Dorsal motor vagal complex
nTPM: 130.7
2133 Female, age 91, both hemispheres 148.4
2000 Male, age 74, unknown 143.0
2844 Male, age 55, unknown 137.5
2813 Female, age 72, unknown 125.9
2797 Male, age 61, both hemispheres 124.9
2643 Male, age 74, both hemispheres 124.0
2185 Male, age 76, both hemispheres 121.6
2807 Female, age 85, both hemispheres 120.4
Dorsal tegmental nucleus
nTPM: 134.1
2083 Male, age 80, both hemispheres 142.3
2326 Male, age 74, both hemispheres 135.7
2358 Male, age 61, both hemispheres 133.7
1936 Male, age 76, left hemisphere 124.7
Dorsolateral tegmental area
nTPM: 135.8
2337 Male, age 61, both hemispheres 140.9
2751 Female, age 85, both hemispheres 140.1
2654 Male, age 80, both hemispheres 139.1
2360 Male, age 74, both hemispheres 129.4
2141 Male, age 76, both hemispheres 129.3
Gigantocellular reticular nuclei, medullary
nTPM: 134.0
2314 Male, age 61, both hemispheres 144.5
1876 Female, age 85, both hemispheres 134.1
2022 Male, age 76, right hemisphere 134.0
2310 Male, age 80, both hemispheres 133.2
2462 Male, age 74, both hemispheres 129.7
2387 Female, age 91, both hemispheres 128.7
Gigantocellular reticular nuclei, pars
nTPM: 136.3
2168 Male, age 76, both hemispheres 150.5
2084 Female, age 85, both hemispheres 138.5
2336 Male, age 61, both hemispheres 137.2
2330 Male, age 80, both hemispheres 128.7
2706 Male, age 80, both hemispheres 126.5
Inferior olive
nTPM: 136.6
2563 Male, age 74, both hemispheres 150.3
2085 Female, age 85, both hemispheres 144.4
2178 Male, age 61, both hemispheres 137.1
2628 Female, age 91, both hemispheres 131.6
2379 Male, age 80, both hemispheres 119.7
Kolliker-Fuse nucleus
nTPM: 135.3
2163 Male, age 80, both hemispheres 141.4
2793 Female, age 91, left hemisphere 140.2
2315 Male, age 76, right hemisphere 124.2
Lateral lemniscal nuclei
nTPM: 137.4
2169 Male, age 76, both hemispheres 152.3
2746 Female, age 85, left hemisphere 142.1
2453 Male, age 74, right hemisphere 136.9
2320 Female, age 91, left hemisphere 129.5
2036 Male, age 80, both hemispheres 126.4
Lateral medullary reticular nucleus
nTPM: 140.6
2305 Male, age 74, both hemispheres 161.0
2044 Male, age 76, both hemispheres 138.4
2852 Male, age 80, both hemispheres 137.6
2190 Female, age 85, both hemispheres 136.8
2374 Male, age 61, both hemispheres 136.1
2804 Female, age 91, both hemispheres 133.5
Lateral parabrachial nucleus
nTPM: 135.0
2139 Female, age 85, right hemisphere 146.6
2013 Male, age 80, both hemispheres 136.6
2790 Male, age 61, both hemispheres 131.8
2792 Male, age 76, both hemispheres 125.0
Lateral vestibular nucleus
nTPM: 138.8
2184 Male, age 76, both hemispheres 141.5
2311 Male, age 80, both hemispheres 136.1
Locus coeruleus
nTPM: 142.3
2123 Female, age 91, both hemispheres 155.6
2014 Male, age 55, unknown 146.1
1980 Male, age 76, both hemispheres 143.8
2720 Male, age 74, both hemispheres 141.7
2162 Male, age 80, both hemispheres 139.5
2317 Female, age 72, unknown 135.7
2788 Male, age 74, unknown 134.0
Medial olivary nucleus
nTPM: 132.7
1943 Male, age 61, both hemispheres 140.6
2138 Female, age 91, both hemispheres 132.5
2851 Male, age 80, both hemispheres 128.8
1962 Male, age 76, both hemispheres 128.7
Medial parabrachial nucleus
nTPM: 137.2
2170 Female, age 91, both hemispheres 143.2
2854 Male, age 80, both hemispheres 140.2
2463 Female, age 85, right hemisphere 137.2
2156 Male, age 61, both hemispheres 135.0
2786 Male, age 76, both hemispheres 130.7
Medial periolivary nuclei
nTPM: 140.3
2063 Male, age 76, both hemispheres 156.0
2171 Female, age 85, both hemispheres 146.5
2791 Male, age 74, right hemisphere 140.3
2081 Male, age 80, both hemispheres 133.1
2458 Female, age 91, both hemispheres 125.7
Medial vestibular nucleus
nTPM: 143.7
2801 Male, age 74, both hemispheres 151.6
2093 Male, age 80, both hemispheres 147.2
2803 Female, age 91, both hemispheres 142.7
2624 Male, age 61, both hemispheres 141.4
2134 Male, age 76, both hemispheres 141.0
2743 Female, age 85, both hemispheres 138.6
Motor facial nucleus
nTPM: 140.0
2062 Male, age 76, both hemispheres 158.2
2365 Male, age 74, right hemisphere 144.0
2126 Male, age 61, both hemispheres 140.7
2697 Female, age 85, both hemispheres 138.3
2327 Male, age 80, both hemispheres 132.7
2795 Female, age 91, both hemispheres 126.2
Motor hypoglossal nucleus
nTPM: 138.3
2132 Female, age 85, both hemispheres 153.6
2125 Female, age 91, both hemispheres 152.9
2461 Male, age 61, both hemispheres 134.2
2182 Male, age 80, both hemispheres 132.7
2277 Male, age 76, both hemispheres 117.9
Motor trigeminal nucleus
nTPM: 133.6
2560 Male, age 74, both hemispheres 137.5
2079 Male, age 80, both hemispheres 137.2
2335 Male, age 61, both hemispheres 132.4
2309 Male, age 76, both hemispheres 132.0
2321 Female, age 91, both hemispheres 129.1
Nuclei of the trapezoid body
nTPM: 145.6
1983 Male, age 76, both hemispheres 163.2
2735 Female, age 85, both hemispheres 152.5
2159 Male, age 61, both hemispheres 152.2
2166 Male, age 80, both hemispheres 136.5
2368 Female, age 91, both hemispheres 123.6
Nucleus ambiguus
nTPM: 144.8
2096 Female, age 85, both hemispheres 153.8
2071 Male, age 76, both hemispheres 135.7
Nucleus cuneatus
nTPM: 129.5
2564 Male, age 74, both hemispheres 142.9
2100 Male, age 76, both hemispheres 133.2
2808 Female, age 85, both hemispheres 128.6
2562 Male, age 61, both hemispheres 126.7
2380 Male, age 80, both hemispheres 122.9
2805 Female, age 91, both hemispheres 122.6
Nucleus gracilis
nTPM: 129.8
2627 Male, age 74, both hemispheres 141.9
2382 Male, age 80, both hemispheres 128.4
2299 Female, age 85, both hemispheres 119.0
Nucleus raphe magnus
nTPM: 145.1
2160 Male, age 61, both hemispheres 160.8
2172 Female, age 85, both hemispheres 158.2
2455 Male, age 74, both hemispheres 149.7
2328 Male, age 80, both hemispheres 137.2
2051 Male, age 76, both hemispheres 136.2
2459 Female, age 91, both hemispheres 128.2
Nucleus raphe obscurus
nTPM: 137.8
2845 Female, age 85, midline 148.2
2800 Male, age 61, midline 142.2
2142 Male, age 76, midline 122.9
Nucleus raphe pallidus
nTPM: 136.1
1924 Male, age 61, midline 145.6
2183 Male, age 80, midline 138.3
2145 Male, age 76, midline 124.4
Nucleus tractus solitarii
nTPM: 122.0
2656 Male, age 76, both hemispheres 124.5
2191 Female, age 85, both hemispheres 123.0
2144 Female, age 91, right hemisphere 122.6
2307 Male, age 80, both hemispheres 117.9
Paramedian reticular nucleus
nTPM: 137.0
2050 Female, age 85, both hemispheres 143.1
2057 Male, age 80, both hemispheres 139.7
2313 Male, age 61, both hemispheres 139.3
2052 Male, age 76, both hemispheres 125.9
Parvicellular reticular nuclei
nTPM: 136.4
2119 Male, age 80, both hemispheres 139.0
2095 Male, age 76, both hemispheres 138.3
2558 Male, age 74, both hemispheres 131.8
Parvicellular reticular nuclei, medullary
nTPM: 140.4
2189 Female, age 91, both hemispheres 142.9
2091 Female, age 85, both hemispheres 141.1
2181 Male, age 80, left hemisphere 137.1
Peritrigeminal nucleus
nTPM: 141.6
2067 Female, age 85, both hemispheres 142.9
2136 Male, age 76, both hemispheres 141.5
2179 Male, age 61, both hemispheres 140.4
Pontine nuclei
nTPM: 151.4
1863 Male, age 55, unknown 164.3
2787 Female, age 85, both hemispheres 161.1
2109 Female, age 72, unknown 158.8
2727 Male, age 61, right hemisphere 157.6
1968 Male, age 76, left hemisphere 153.6
2454 Male, age 74, left hemisphere 149.8
2115 Male, age 80, left hemisphere 133.1
2319 Female, age 91, both hemispheres 132.9
Pontine raphe nucleus
nTPM: 141.9
2122 Female, age 85, midline 147.0
2853 Male, age 76, midline 136.8
Posteroventral cochlear nucleus
nTPM: 135.5
2752 Female, age 85, both hemispheres 144.4
2070 Male, age 76, both hemispheres 138.1
2135 Female, age 91, both hemispheres 135.7
2341 Male, age 80, both hemispheres 133.7
2371 Male, age 61, both hemispheres 125.5
Prepositus hypoglossal nucleus
nTPM: 136.6
2855 Female, age 85, right hemisphere 145.9
2086 Male, age 80, both hemispheres 127.3
Principal sensory trigeminal nucleus
nTPM: 138.2
2158 Male, age 61, both hemispheres 151.9
2008 Male, age 80, left hemisphere 135.9
2324 Male, age 76, both hemispheres 132.7
2367 Female, age 91, left hemisphere 132.1
Reticular pontine nucleus, caudal
nTPM: 139.8
2559 Male, age 74, both hemispheres 147.6
2092 Male, age 76, both hemispheres 146.6
2332 Male, age 80, right hemisphere 136.5
2457 Female, age 91, both hemispheres 128.5
Reticular pontine nucleus, oral
nTPM: 136.3
2012 Female, age 85, both hemispheres 138.3
2167 Male, age 76, both hemispheres 138.3
2361 Male, age 74, both hemispheres 137.3
1939 Male, age 80, both hemispheres 136.1
2366 Female, age 91, both hemispheres 131.6
Reticulotegmental nucleus
nTPM: 135.7
2325 Male, age 76, both hemispheres 140.2
2322 Female, age 91, both hemispheres 135.5
2452 Male, age 74, both hemispheres 133.8
2333 Male, age 80, both hemispheres 133.5
Spinal trigeminal nucleus, caudal
nTPM: 135.9
2390 Female, age 91, both hemispheres 142.6
2447 Male, age 76, both hemispheres 139.5
2308 Male, age 80, both hemispheres 134.3
2642 Male, age 74, both hemispheres 132.8
2312 Male, age 61, both hemispheres 130.1
Spinal trigeminal nucleus, interpolar
nTPM: 143.2
2066 Male, age 76, right hemisphere 152.1
2625 Male, age 61, both hemispheres 149.5
2033 Male, age 80, both hemispheres 139.5
2386 Female, age 85, both hemispheres 137.7
2389 Female, age 91, both hemispheres 137.4
Spinal trigeminal nucleus, oral
nTPM: 135.7
2164 Male, age 80, both hemispheres 139.8
2737 Female, age 85, both hemispheres 135.5
1978 Male, age 76, both hemispheres 131.7
Spinal vestibular nucleus
nTPM: 140.7
2186 Female, age 91, both hemispheres 145.5
2748 Male, age 76, both hemispheres 143.1
2780 Male, age 80, both hemispheres 142.8
2806 Female, age 85, both hemispheres 141.5
2384 Male, age 74, both hemispheres 137.9
2796 Male, age 61, both hemispheres 133.4
Subcoeruleus area
nTPM: 135.4
2323 Female, age 91, left hemisphere 138.3
1958 Male, age 80, both hemispheres 137.5
2089 Male, age 76, left hemisphere 136.7
2369 Female, age 85, left hemisphere 135.1
2451 Male, age 74, both hemispheres 129.5
Superior olive
nTPM: 139.2
1875 Female, age 85, both hemispheres 144.4
2364 Male, age 74, right hemisphere 143.7
2020 Male, age 76, both hemispheres 141.7
2329 Male, age 80, right hemisphere 134.7
2561 Female, age 91, both hemispheres 131.7
Superior vestibular nucleus
nTPM: 133.3
2015 Male, age 80, both hemispheres 135.8
2383 Male, age 74, both hemispheres 134.2
2061 Male, age 76, both hemispheres 130.1
Ventral medullary reticular nucleus
nTPM: 134.1
2060 Male, age 76, both hemispheres 137.8
2372 Male, age 61, both hemispheres 130.3
Ventral periolivary nuclei
nTPM: 140.2
2130 Female, age 85, both hemispheres 152.1
2165 Male, age 80, both hemispheres 141.9
2023 Male, age 76, both hemispheres 139.4
2794 Female, age 91, left hemisphere 127.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 138.9
2741 Female, age 85, both hemispheres 142.9
2180 Male, age 61, both hemispheres 141.8
1986 Male, age 76, both hemispheres 139.5
2118 Male, age 80, both hemispheres 137.0
2302 Female, age 91, both hemispheres 133.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 134.7
2449 Male, age 74, both hemispheres 141.6
1959 Male, age 76, both hemispheres 140.7
2840 Female, age 85, both hemispheres 136.0
2161 Male, age 80, both hemispheres 134.5
2359 Male, age 61, both hemispheres 130.8
2456 Female, age 91, both hemispheres 124.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 400.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 328.2
FF:10182-103D2 60 years, female 407.9
FF:10165-103B3 76 years, female 248.5
Medulla oblongata
Scaled Tags Per Million: 300.4
FF:10038-101F2 18-64 years, mixed 352.5
FF:10174-103C3 60 years, female 321.2
FF:10155-103A2 76 years, female 227.5
Pons
Scaled Tags Per Million: 400.2
FF:10033-101E6 18-54 years, mixed 400.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 101.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 82.9
Samples: 4

Max nTPM: 90.1
Min nTPM: 78.1
Sample A Female 83.7
Sample B Female 79.7
Sample C Male 90.1
Sample D Male 78.1
Pons
nTPM: 101.4
Samples: 4

Max nTPM: 120.9
Min nTPM: 73.0
Sample A Female 120.9
Sample B Female 73.0
Sample C Male 93.1
Sample D Male 118.7

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 291.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 291.8
Samples: 4

Max nTPM: 310.9
Min nTPM: 274.9
Sample A Male 291.0
Sample B Male 274.9
Sample C Female 310.9
Sample D Female 290.2

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.7
74819690 Antisense, RP_060315_02_H06, Mouse strain C57BL/6J (56 days, male) 9.9
69838610 Antisense, RP_050310_02_C09, Mouse strain C57BL/6J (56 days, male) 9.4
Pons
Expression energy: 8.8
74819690 Antisense, RP_060315_02_H06, Mouse strain C57BL/6J (56 days, male) 9.1
69838610 Antisense, RP_050310_02_C09, Mouse strain C57BL/6J (56 days, male) 8.5

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