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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1528.9 nTPM
FANTOM5:1260.3 Scaled Tags Per Million
Pig:606.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA004128
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1528.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1528.9
Samples: 246

Max nTPM: 6108.2
Min nTPM: 364.9
Std nTPM: 857.3
Median nTPM: 1293.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 6108.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 5331.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 4456.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 4354.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3932.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3855.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 3403.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 3307.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3263.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3225.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 3212.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 3136.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3048.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 2893.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2835.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 2834.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2816.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2790.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 2773.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 2765.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2760.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 2758.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2744.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 2703.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2696.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2649.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 2636.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 2624.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2610.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 2568.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2561.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 2499.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 2479.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2474.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2420.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 2379.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2373.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 2334.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2332.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2318.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 2257.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2254.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 2228.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2212.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 2193.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2193.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2189.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2171.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2162.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2137.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 2134.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 2134.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 2120.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 2113.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 2101.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 2079.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 2078.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 2034.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 2034.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 2017.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2015.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 2006.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 2006.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1974.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1935.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1925.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1914.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1910.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1877.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1875.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1847.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1801.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1794.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1746.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1715.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1693.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1689.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1665.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1662.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1659.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1653.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1652.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1638.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1637.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1634.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1632.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1631.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1628.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1623.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1623.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1616.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1613.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1611.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1554.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1541.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1531.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1521.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1490.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1489.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1480.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1477.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1472.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1461.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1461.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1453.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1439.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1433.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1423.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1417.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1414.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1413.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1409.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1389.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1389.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1382.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1367.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1355.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1355.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1349.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1304.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1301.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1301.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1295.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1291.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1290.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1289.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1288.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1287.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1287.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1286.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1265.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1259.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1249.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1244.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1235.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1234.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1216.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1205.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1205.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1199.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1189.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1165.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1165.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1153.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1144.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1131.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1120.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1119.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1117.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1116.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1076.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1075.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1065.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1063.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1060.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1056.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1051.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1042.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1035.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1035.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1033.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1032.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1021.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1019.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1018.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1017.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1007.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 997.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 996.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 992.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 990.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 986.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 975.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 975.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 967.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 955.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 942.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 940.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 931.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 926.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 924.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 910.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 907.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 904.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 900.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 898.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 885.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 881.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 876.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 873.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 873.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 868.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 863.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 861.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 858.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 857.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 857.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 855.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 846.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 845.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 844.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 832.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 829.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 828.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 823.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 822.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 821.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 814.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 808.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 794.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 790.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 790.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 770.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 769.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 766.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 764.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 729.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 727.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 727.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 710.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 706.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 699.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 696.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 674.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 668.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 658.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 650.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 638.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 635.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 628.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 597.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 596.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 593.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 586.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 583.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 574.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 569.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 565.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 565.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 546.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 501.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 496.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 429.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 405.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 394.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 364.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1260.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1260.3
FF:10164-103B2 76 years, female 1260.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 606.4
Pig sample Sample description nTPM
Caudate
nTPM: 606.4
Samples: 4

Max nTPM: 673.2
Min nTPM: 478.7
Sample A Female 669.5
Sample B Female 478.7
Sample C Male 604.1
Sample D Male 673.2

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