HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:180.9 nTPM
HPA:180.9 nTPM
GTEx:135.6 nTPM
FANTOM5:237.3 Scaled Tags Per Million
Pig:108.2 nTPM
Mouse:321.6 nTPM
Allen mouse:22.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054102
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 180.9
Sample id Sample description nTPM
Hippocampus
nTPM: 156.8
1898 Male, age 80, left hemisphere 170.1
2621 Female, age 67, right hemisphere 164.6
1855 Male, age 76, left hemisphere 160.6
2529 Female, age 94, left hemisphere 151.7
1911 Female, age 85, right hemisphere 150.6
2148 Female, age 91, left hemisphere 143.1
Dentate gyrus
nTPM: 158.0
2010 Male, age 76, both hemispheres 174.2
1927 Female, age 91, both hemispheres 168.9
2246 Female, age 85, both hemispheres 160.7
2531 Female, age 67, both hemispheres 150.7
2530 Female, age 94, left hemisphere 148.6
2528 Male, age 74, both hemispheres 144.9
Entorhinal gyrus
nTPM: 158.1
1938 Female, age 85, left hemisphere 171.0
2764 Male, age 80, right hemisphere 169.6
1787 Male, age 76, left hemisphere 159.2
2613 Female, age 94, left hemisphere 153.2
2686 Male, age 75, right hemisphere 150.7
2117 Female, age 91, right hemisphere 144.7
Hippocampus, CA1
nTPM: 171.0
2749 Male, age 80, left hemisphere 209.3
2527 Male, age 74, both hemispheres 166.8
1873 Female, age 85, both hemispheres 166.7
2045 Male, age 76, both hemispheres 165.1
2082 Female, age 91, right hemisphere 146.8
Hippocampus, CA2
nTPM: 159.4
1892 Male, age 76, both hemispheres 181.5
2249 Male, age 74, both hemispheres 165.2
1963 Male, age 80, left hemisphere 162.6
1940 Female, age 85, left hemisphere 152.0
2437 Female, age 94, left hemisphere 150.1
2113 Female, age 91, right hemisphere 145.2
Hippocampus, CA3
nTPM: 167.5
2137 Male, age 80, left hemisphere 198.0
2436 Male, age 74, both hemispheres 180.5
1867 Male, age 76, both hemispheres 178.3
1891 Female, age 85, both hemispheres 155.3
2620 Female, age 94, left hemisphere 152.4
2861 Female, age 67, both hemispheres 140.7
Parahippocampal cortex
nTPM: 165.1
1850 Male, age 80, both hemispheres 185.5
2245 Female, age 91, both hemispheres 176.6
1933 Female, age 85, both hemispheres 173.8
2532 Female, age 72, left hemisphere 172.6
2018 Male, age 76, both hemispheres 162.7
2250 Female, age 67, right hemisphere 162.7
1990 Female, age 91, right hemisphere 162.3
2693 Female, age 94, both hemispheres 162.2
2622 Female, age 67, right hemisphere 148.0
2692 Male, age 74, both hemispheres 144.7
Perirhinal gyrus
nTPM: 180.9
1841 Female, age 85, right hemisphere 192.8
1847 Female, age 91, left hemisphere 185.3
1794 Male, age 80, right hemisphere 182.7
2848 Male, age 76, right hemisphere 172.2
2521 Female, age 94, right hemisphere 171.5
Subiculum
nTPM: 156.1
1901 Male, age 80, both hemispheres 169.4
1977 Female, age 85, both hemispheres 167.7
2042 Male, age 76, both hemispheres 163.5
2438 Female, age 94, left hemisphere 154.9
2619 Male, age 74, both hemispheres 146.9
2729 Female, age 91, right hemisphere 134.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 135.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.6
Samples: 197

Max nTPM: 256.5
Min nTPM: 83.7
Std nTPM: 27.4
Median nTPM: 132.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 256.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 233.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 215.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 213.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 207.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 198.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 193.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 184.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 182.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 182.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 181.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 237.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.3
FF:10169-103B7 60 years, female 286.7
FF:10153-102I9 76 years, female 187.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 108.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 100.7
Samples: 4

Max nTPM: 119.2
Min nTPM: 78.3
Sample A Female 119.2
Sample B Female 104.1
Sample C Male 101.2
Sample D Male 78.3
Entorhinal cortex
nTPM: 98.8
Samples: 4

Max nTPM: 109.3
Min nTPM: 89.8
Sample A Female 97.0
Sample B Female 109.3
Sample C Male 98.9
Sample D Male 89.8
Subiculum
nTPM: 108.2
Samples: 4

Max nTPM: 133.4
Min nTPM: 96.0
Sample A Female 133.4
Sample B Female 101.7
Sample C Male 101.8
Sample D Male 96.0
Ventral hippocampus
nTPM: 99.9
Samples: 4

Max nTPM: 113.4
Min nTPM: 83.3
Sample A Female 113.4
Sample B Female 83.3
Sample C Male 107.5
Sample D Male 95.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 321.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 304.8
Samples: 4

Max nTPM: 335.7
Min nTPM: 260.4
Sample A Male 260.4
Sample B Male 300.6
Sample C Female 322.6
Sample D Female 335.7
Hippocampal formation
nTPM: 321.7
Samples: 4

Max nTPM: 373.0
Min nTPM: 293.5
Sample A Male 373.0
Sample B Male 304.2
Sample C Female 293.5
Sample D Female 315.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.5
70946634 Antisense, RP_050505_01_F06, Mouse strain C57BL/6J (56 days, male) 22.5

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