COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.2 nTPM
HPA:13.3 nTPM
GTEx:35.2 nTPM
FANTOM5:59.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 13.3
overview
Male, age 54 		Colon sample 67
nTPM: 31.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 15.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 12.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 13.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 12.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 16.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 35.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 35.2
Samples: 373

Max nTPM: 69.0
Min nTPM: 12.2
Std nTPM: 10.4
Median nTPM: 33.8
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 69.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 68.7
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 67.9
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 62.9
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 61.9
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 60.4
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 59.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 59.1
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 58.5
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 58.4
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 57.9
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Colon - Transverse
Average nTPM: 28.3
Samples: 406

Max nTPM: 65.6
Min nTPM: 7.7
Std nTPM: 7.9
Median nTPM: 27.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 65.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 60.5
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 60.2
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 58.1
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 53.7
GTEX-11GSP-1626-SM-5986N 60-69 years, female 52.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 51.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 51.3
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 47.1
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 46.9
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 46.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 59.7
FF:10014-101C5 62,83,84 years, mixed 59.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.