HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.9 nTPM
HPA:33.9 nTPM
GTEx:24.8 nTPM
FANTOM5:41.8 Scaled Tags Per Million
Pig:7.4 nTPM
Mouse:24.4 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042652
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.9
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
1911 Female, age 85, right hemisphere 34.7
2148 Female, age 91, left hemisphere 34.4
1855 Male, age 76, left hemisphere 32.1
2621 Female, age 67, right hemisphere 31.4
1898 Male, age 80, left hemisphere 29.8
2529 Female, age 94, left hemisphere 28.9
Dentate gyrus
nTPM: 31.9
2531 Female, age 67, both hemispheres 37.2
2010 Male, age 76, both hemispheres 33.7
1927 Female, age 91, both hemispheres 33.6
2246 Female, age 85, both hemispheres 31.5
2528 Male, age 74, both hemispheres 29.4
2530 Female, age 94, left hemisphere 26.0
Entorhinal gyrus
nTPM: 24.9
2117 Female, age 91, right hemisphere 26.8
1938 Female, age 85, left hemisphere 25.5
1787 Male, age 76, left hemisphere 25.4
2686 Male, age 75, right hemisphere 24.2
2764 Male, age 80, right hemisphere 23.9
2613 Female, age 94, left hemisphere 23.6
Hippocampus, CA1
nTPM: 33.9
2045 Male, age 76, both hemispheres 49.9
1873 Female, age 85, both hemispheres 34.9
2749 Male, age 80, left hemisphere 29.8
2527 Male, age 74, both hemispheres 29.5
2082 Female, age 91, right hemisphere 25.6
Hippocampus, CA2
nTPM: 27.6
2249 Male, age 74, both hemispheres 29.0
1963 Male, age 80, left hemisphere 28.6
1940 Female, age 85, left hemisphere 27.6
1892 Male, age 76, both hemispheres 26.9
2113 Female, age 91, right hemisphere 26.7
2437 Female, age 94, left hemisphere 26.6
Hippocampus, CA3
nTPM: 31.7
2620 Female, age 94, left hemisphere 35.2
2861 Female, age 67, both hemispheres 34.8
2436 Male, age 74, both hemispheres 30.6
1891 Female, age 85, both hemispheres 30.5
2137 Male, age 80, left hemisphere 29.7
1867 Male, age 76, both hemispheres 29.2
Parahippocampal cortex
nTPM: 25.7
2250 Female, age 67, right hemisphere 27.9
2245 Female, age 91, both hemispheres 27.2
2622 Female, age 67, right hemisphere 26.2
1933 Female, age 85, both hemispheres 26.0
2018 Male, age 76, both hemispheres 25.6
2693 Female, age 94, both hemispheres 25.4
1990 Female, age 91, right hemisphere 25.3
2692 Male, age 74, both hemispheres 25.1
2532 Female, age 72, left hemisphere 24.4
1850 Male, age 80, both hemispheres 24.0
Perirhinal gyrus
nTPM: 26.4
2521 Female, age 94, right hemisphere 28.2
1841 Female, age 85, right hemisphere 27.3
1794 Male, age 80, right hemisphere 26.5
1847 Female, age 91, left hemisphere 26.2
2848 Male, age 76, right hemisphere 23.7
Subiculum
nTPM: 27.9
2729 Female, age 91, right hemisphere 33.5
1977 Female, age 85, both hemispheres 28.4
2619 Male, age 74, both hemispheres 27.5
2042 Male, age 76, both hemispheres 27.2
1901 Male, age 80, both hemispheres 25.7
2438 Female, age 94, left hemisphere 24.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 60.3
Min nTPM: 11.7
Std nTPM: 8.0
Median nTPM: 23.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 60.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 54.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 54.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 51.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 50.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 45.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 44.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 43.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 42.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 40.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 40.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.8
FF:10153-102I9 76 years, female 42.9
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.6
Samples: 4

Max nTPM: 5.4
Min nTPM: 3.7
Sample A Female 5.4
Sample B Female 5.1
Sample C Male 4.1
Sample D Male 3.7
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.4
Sample A Female 4.5
Sample B Female 4.7
Sample C Male 5.0
Sample D Male 3.4
Subiculum
nTPM: 6.5
Samples: 4

Max nTPM: 7.1
Min nTPM: 5.4
Sample A Female 6.8
Sample B Female 6.5
Sample C Male 7.1
Sample D Male 5.4
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 11.8
Min nTPM: 3.1
Sample A Female 8.6
Sample B Female 6.1
Sample C Male 11.8
Sample D Male 3.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.2
Sample A Male 13.6
Sample B Male 13.2
Sample C Female 16.1
Sample D Female 14.0
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 25.1
Min nTPM: 23.4
Sample A Male 24.7
Sample B Male 24.3
Sample C Female 25.1
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
641524 Antisense, RP_040914_01_D12, Mouse strain C57BL/6J (56 days, male) 0.6

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