HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:107.0 nTPM
HPA:107.0 nTPM
GTEx:117.6 nTPM
FANTOM5:266.4 Scaled Tags Per Million
Pig:78.7 nTPM
Mouse:138.5 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072058
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.0
Sample id Sample description nTPM
Hippocampus
nTPM: 74.2
2621 Female, age 67, right hemisphere 84.5
1898 Male, age 80, left hemisphere 83.6
2148 Female, age 91, left hemisphere 75.8
1855 Male, age 76, left hemisphere 69.2
1911 Female, age 85, right hemisphere 66.8
2529 Female, age 94, left hemisphere 65.3
Dentate gyrus
nTPM: 79.5
1927 Female, age 91, both hemispheres 96.8
2531 Female, age 67, both hemispheres 89.6
2530 Female, age 94, left hemisphere 86.0
2246 Female, age 85, both hemispheres 73.4
2528 Male, age 74, both hemispheres 67.1
2010 Male, age 76, both hemispheres 64.2
Entorhinal gyrus
nTPM: 90.7
2613 Female, age 94, left hemisphere 125.7
1787 Male, age 76, left hemisphere 98.0
2764 Male, age 80, right hemisphere 95.4
1938 Female, age 85, left hemisphere 89.0
2686 Male, age 75, right hemisphere 81.2
2117 Female, age 91, right hemisphere 55.1
Hippocampus, CA1
nTPM: 86.0
2749 Male, age 80, left hemisphere 138.9
2527 Male, age 74, both hemispheres 76.5
1873 Female, age 85, both hemispheres 75.7
2082 Female, age 91, right hemisphere 73.9
2045 Male, age 76, both hemispheres 64.8
Hippocampus, CA2
nTPM: 76.6
1892 Male, age 76, both hemispheres 93.5
2437 Female, age 94, left hemisphere 92.1
1963 Male, age 80, left hemisphere 83.0
2113 Female, age 91, right hemisphere 68.2
2249 Male, age 74, both hemispheres 64.8
1940 Female, age 85, left hemisphere 57.8
Hippocampus, CA3
nTPM: 89.5
2137 Male, age 80, left hemisphere 126.3
2620 Female, age 94, left hemisphere 123.2
2861 Female, age 67, both hemispheres 93.3
1867 Male, age 76, both hemispheres 76.4
2436 Male, age 74, both hemispheres 59.0
1891 Female, age 85, both hemispheres 58.7
Parahippocampal cortex
nTPM: 89.1
2245 Female, age 91, both hemispheres 112.8
2693 Female, age 94, both hemispheres 107.4
2622 Female, age 67, right hemisphere 94.7
1990 Female, age 91, right hemisphere 94.3
2250 Female, age 67, right hemisphere 91.9
1850 Male, age 80, both hemispheres 86.5
2532 Female, age 72, left hemisphere 80.6
1933 Female, age 85, both hemispheres 78.2
2018 Male, age 76, both hemispheres 72.9
2692 Male, age 74, both hemispheres 71.9
Perirhinal gyrus
nTPM: 107.0
2521 Female, age 94, right hemisphere 126.7
1847 Female, age 91, left hemisphere 115.6
1794 Male, age 80, right hemisphere 107.1
1841 Female, age 85, right hemisphere 94.4
2848 Male, age 76, right hemisphere 91.2
Subiculum
nTPM: 71.4
1977 Female, age 85, both hemispheres 84.9
1901 Male, age 80, both hemispheres 79.6
2619 Male, age 74, both hemispheres 79.6
2438 Female, age 94, left hemisphere 74.4
2042 Male, age 76, both hemispheres 57.5
2729 Female, age 91, right hemisphere 52.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 117.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 117.6
Samples: 197

Max nTPM: 283.5
Min nTPM: 6.8
Std nTPM: 60.1
Median nTPM: 120.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 283.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 261.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 261.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 241.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 232.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 229.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 228.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 221.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 221.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 215.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 214.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 266.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 266.4
FF:10169-103B7 60 years, female 346.3
FF:10153-102I9 76 years, female 186.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.4
Samples: 4

Max nTPM: 69.9
Min nTPM: 52.9
Sample A Female 68.3
Sample B Female 69.9
Sample C Male 52.9
Sample D Male 54.4
Entorhinal cortex
nTPM: 78.7
Samples: 4

Max nTPM: 87.6
Min nTPM: 69.4
Sample A Female 87.6
Sample B Female 81.0
Sample C Male 76.6
Sample D Male 69.4
Subiculum
nTPM: 55.2
Samples: 4

Max nTPM: 78.7
Min nTPM: 43.5
Sample A Female 78.7
Sample B Female 47.1
Sample C Male 51.6
Sample D Male 43.5
Ventral hippocampus
nTPM: 50.8
Samples: 4

Max nTPM: 60.3
Min nTPM: 38.3
Sample A Female 44.9
Sample B Female 38.3
Sample C Male 59.5
Sample D Male 60.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 138.5
Samples: 4

Max nTPM: 168.6
Min nTPM: 119.6
Sample A Male 133.5
Sample B Male 132.4
Sample C Female 119.6
Sample D Female 168.6
Hippocampal formation
nTPM: 104.8
Samples: 4

Max nTPM: 119.0
Min nTPM: 87.1
Sample A Male 87.1
Sample B Male 115.5
Sample C Female 119.0
Sample D Female 97.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
72001898 Antisense, RP_050915_02_E04, Mouse strain C57BL/6J (56 days, male) 8.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.