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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:94.7 nTPM
FANTOM5:141.1 Scaled Tags Per Million
Pig:27.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA005716Antibody CAB013240
Glial cells MediumLow
Neuronal cells HighLow




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 94.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 94.7
Samples: 246

Max nTPM: 409.1
Min nTPM: 5.6
Std nTPM: 53.7
Median nTPM: 83.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 409.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 312.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 284.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 267.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 265.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 262.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 243.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 194.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 191.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 190.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 189.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 189.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 183.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 183.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 177.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 176.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 168.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 165.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 162.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 161.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 161.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 160.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 158.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 156.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 154.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 154.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 153.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 151.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 150.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 150.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 150.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 148.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 148.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 147.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 146.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 144.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 141.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 140.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 139.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 139.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 138.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 137.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 137.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 136.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 135.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 134.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 133.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 131.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 131.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 130.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 129.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 128.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 127.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 127.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 126.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 126.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 125.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 125.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 125.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 124.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 121.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 121.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 120.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 119.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 117.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 117.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 116.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 115.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 112.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 112.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 110.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 110.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 109.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 108.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 108.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 108.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 106.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 106.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 105.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 105.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 105.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 103.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 103.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 103.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 103.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 101.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 101.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 99.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 99.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 99.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 98.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 97.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 97.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 96.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 96.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 95.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 95.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 94.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 94.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 93.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 93.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 93.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 93.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 92.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 92.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 92.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 91.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 91.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 90.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 89.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 89.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 89.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 88.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 87.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 87.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 87.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 87.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 86.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 84.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 83.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 83.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 82.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 82.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 82.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 81.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 81.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 81.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 80.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 80.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 79.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 78.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 78.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 78.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 78.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 77.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 77.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 75.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 75.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 74.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 74.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 73.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 72.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 72.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 71.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 69.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 68.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 68.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 67.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 66.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 66.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 66.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 66.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 66.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 66.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 66.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 65.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 65.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 64.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 64.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 63.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 63.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 63.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 63.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 63.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 62.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 61.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 61.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 60.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 59.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 59.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 58.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 58.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 55.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 55.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 55.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 54.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 54.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 53.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 53.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 53.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 52.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 52.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 51.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 51.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 51.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 51.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 51.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 50.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 50.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 50.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 49.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 48.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 48.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 48.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 46.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 43.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 42.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 41.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 41.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 41.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 41.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 40.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 40.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 39.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 37.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 35.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 32.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 31.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 29.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 28.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 26.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 22.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 15.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 13.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 8.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 7.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 141.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 141.1
FF:10164-103B2 76 years, female 141.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 27.3
Pig sample Sample description nTPM
Caudate
nTPM: 27.3
Samples: 4

Max nTPM: 36.3
Min nTPM: 18.2
Sample A Female 18.2
Sample B Female 26.5
Sample C Male 36.3
Sample D Male 28.2

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