HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.6 nTPM
HPA:26.6 nTPM
GTEx:29.7 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:51.2 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063265
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
1898 Male, age 80, left hemisphere 15.0
2148 Female, age 91, left hemisphere 14.9
2621 Female, age 67, right hemisphere 14.6
1855 Male, age 76, left hemisphere 10.6
2529 Female, age 94, left hemisphere 10.2
1911 Female, age 85, right hemisphere 8.6
Dentate gyrus
nTPM: 13.2
1927 Female, age 91, both hemispheres 17.0
2531 Female, age 67, both hemispheres 16.3
2246 Female, age 85, both hemispheres 12.3
2530 Female, age 94, left hemisphere 12.1
2528 Male, age 74, both hemispheres 11.1
2010 Male, age 76, both hemispheres 10.6
Entorhinal gyrus
nTPM: 21.4
2613 Female, age 94, left hemisphere 31.0
2764 Male, age 80, right hemisphere 25.4
2686 Male, age 75, right hemisphere 23.3
1787 Male, age 76, left hemisphere 19.9
1938 Female, age 85, left hemisphere 19.0
2117 Female, age 91, right hemisphere 9.9
Hippocampus, CA1
nTPM: 15.4
2749 Male, age 80, left hemisphere 24.2
2082 Female, age 91, right hemisphere 16.0
2527 Male, age 74, both hemispheres 12.9
2045 Male, age 76, both hemispheres 12.0
1873 Female, age 85, both hemispheres 11.8
Hippocampus, CA2
nTPM: 12.7
2437 Female, age 94, left hemisphere 15.2
1892 Male, age 76, both hemispheres 15.1
2113 Female, age 91, right hemisphere 13.9
1940 Female, age 85, left hemisphere 12.7
1963 Male, age 80, left hemisphere 11.6
2249 Male, age 74, both hemispheres 7.7
Hippocampus, CA3
nTPM: 15.4
2137 Male, age 80, left hemisphere 22.9
2620 Female, age 94, left hemisphere 20.2
2861 Female, age 67, both hemispheres 16.4
1867 Male, age 76, both hemispheres 15.5
1891 Female, age 85, both hemispheres 9.1
2436 Male, age 74, both hemispheres 8.3
Parahippocampal cortex
nTPM: 19.5
2622 Female, age 67, right hemisphere 23.1
1850 Male, age 80, both hemispheres 21.7
2245 Female, age 91, both hemispheres 21.7
2693 Female, age 94, both hemispheres 21.5
1990 Female, age 91, right hemisphere 20.6
2250 Female, age 67, right hemisphere 19.0
1933 Female, age 85, both hemispheres 18.4
2532 Female, age 72, left hemisphere 18.4
2018 Male, age 76, both hemispheres 15.5
2692 Male, age 74, both hemispheres 15.3
Perirhinal gyrus
nTPM: 26.6
1847 Female, age 91, left hemisphere 33.8
1794 Male, age 80, right hemisphere 29.3
2521 Female, age 94, right hemisphere 28.4
2848 Male, age 76, right hemisphere 21.3
1841 Female, age 85, right hemisphere 20.5
Subiculum
nTPM: 13.2
1977 Female, age 85, both hemispheres 16.7
2619 Male, age 74, both hemispheres 16.6
2438 Female, age 94, left hemisphere 14.5
1901 Male, age 80, both hemispheres 13.5
2729 Female, age 91, right hemisphere 10.1
2042 Male, age 76, both hemispheres 7.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.7
Samples: 197

Max nTPM: 99.1
Min nTPM: 3.1
Std nTPM: 17.2
Median nTPM: 28.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 99.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 84.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 72.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 66.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 66.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 64.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 61.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 61.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 61.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 61.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.0
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 20.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.8
Sample A Female 20.0
Sample B Female 17.8
Sample C Male 17.0
Sample D Male 12.8
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.1
Min nTPM: 19.3
Sample A Female 21.0
Sample B Female 20.0
Sample C Male 22.1
Sample D Male 19.3
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 21.4
Min nTPM: 14.1
Sample A Female 21.4
Sample B Female 16.8
Sample C Male 19.7
Sample D Male 14.1
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 25.0
Min nTPM: 13.2
Sample A Female 20.0
Sample B Female 13.2
Sample C Male 25.0
Sample D Male 17.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 57.3
Min nTPM: 47.0
Sample A Male 47.0
Sample B Male 49.4
Sample C Female 51.0
Sample D Female 57.3
Hippocampal formation
nTPM: 46.7
Samples: 4

Max nTPM: 50.2
Min nTPM: 45.0
Sample A Male 45.7
Sample B Male 45.7
Sample C Female 45.0
Sample D Female 50.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
75774676 Antisense, RP_060530_01_D01, Mouse strain C57BL/6J (56 days, male) 10.1
587406 Antisense, RP_040831_01_E01, Mouse strain C57BL/6J (56 days, male) 10.0

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The Human Protein Atlas

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