HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.0 nTPM
HPA:24.0 nTPM
GTEx:19.1 nTPM
FANTOM5:15.8 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:15.6 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.0
Sample id Sample description nTPM
Hippocampus
nTPM: 16.2
2621 Female, age 67, right hemisphere 21.7
2148 Female, age 91, left hemisphere 20.5
1855 Male, age 76, left hemisphere 17.5
2529 Female, age 94, left hemisphere 14.3
1911 Female, age 85, right hemisphere 14.1
1898 Male, age 80, left hemisphere 9.0
Dentate gyrus
nTPM: 17.8
1927 Female, age 91, both hemispheres 23.0
2010 Male, age 76, both hemispheres 21.5
2246 Female, age 85, both hemispheres 18.4
2531 Female, age 67, both hemispheres 17.1
2530 Female, age 94, left hemisphere 15.0
2528 Male, age 74, both hemispheres 11.9
Entorhinal gyrus
nTPM: 18.3
2613 Female, age 94, left hemisphere 26.5
1938 Female, age 85, left hemisphere 21.5
1787 Male, age 76, left hemisphere 21.3
2686 Male, age 75, right hemisphere 15.1
2764 Male, age 80, right hemisphere 13.7
2117 Female, age 91, right hemisphere 11.5
Hippocampus, CA1
nTPM: 24.0
2045 Male, age 76, both hemispheres 46.1
2749 Male, age 80, left hemisphere 30.4
2082 Female, age 91, right hemisphere 19.2
2527 Male, age 74, both hemispheres 15.5
1873 Female, age 85, both hemispheres 8.8
Hippocampus, CA2
nTPM: 12.9
1940 Female, age 85, left hemisphere 17.2
1963 Male, age 80, left hemisphere 14.7
2113 Female, age 91, right hemisphere 13.9
2249 Male, age 74, both hemispheres 11.6
1892 Male, age 76, both hemispheres 10.2
2437 Female, age 94, left hemisphere 10.0
Hippocampus, CA3
nTPM: 16.3
2861 Female, age 67, both hemispheres 21.9
2137 Male, age 80, left hemisphere 20.6
1867 Male, age 76, both hemispheres 18.4
2620 Female, age 94, left hemisphere 18.4
1891 Female, age 85, both hemispheres 9.5
2436 Male, age 74, both hemispheres 9.0
Parahippocampal cortex
nTPM: 13.8
2018 Male, age 76, both hemispheres 18.2
1933 Female, age 85, both hemispheres 16.0
2245 Female, age 91, both hemispheres 16.0
2532 Female, age 72, left hemisphere 15.9
1850 Male, age 80, both hemispheres 14.1
1990 Female, age 91, right hemisphere 13.3
2622 Female, age 67, right hemisphere 12.8
2250 Female, age 67, right hemisphere 12.0
2692 Male, age 74, both hemispheres 11.8
2693 Female, age 94, both hemispheres 8.3
Perirhinal gyrus
nTPM: 13.6
1847 Female, age 91, left hemisphere 19.9
2521 Female, age 94, right hemisphere 19.4
1794 Male, age 80, right hemisphere 12.7
1841 Female, age 85, right hemisphere 8.1
2848 Male, age 76, right hemisphere 7.7
Subiculum
nTPM: 15.2
2042 Male, age 76, both hemispheres 24.8
1901 Male, age 80, both hemispheres 17.5
2438 Female, age 94, left hemisphere 14.9
1977 Female, age 85, both hemispheres 14.8
2619 Male, age 74, both hemispheres 10.9
2729 Female, age 91, right hemisphere 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 41.4
Min nTPM: 8.2
Std nTPM: 5.6
Median nTPM: 17.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 41.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 39.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 36.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 35.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 32.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 31.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 30.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 30.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 30.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 30.2
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.8
FF:10153-102I9 76 years, female 18.1
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 18.2
Min nTPM: 8.9
Sample A Female 12.0
Sample B Female 12.6
Sample C Male 18.2
Sample D Male 8.9
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 34.3
Min nTPM: 21.4
Sample A Female 32.3
Sample B Female 21.4
Sample C Male 34.3
Sample D Male 26.5
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 21.9
Min nTPM: 15.7
Sample A Female 21.9
Sample B Female 15.7
Sample C Male 19.0
Sample D Male 19.1
Ventral hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 11.3
Sample C Male 17.8
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.1
Sample A Male 15.7
Sample B Male 17.1
Sample C Female 13.1
Sample D Female 16.4
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.4
Sample A Male 12.2
Sample B Male 11.4
Sample C Female 13.7
Sample D Female 12.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
74635331 Antisense, RP_060215_03_F10, Mouse strain C57BL/6J (56 days, male) 1.3

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