HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.8 nTPM
HPA:35.8 nTPM
GTEx:33.1 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:57.4 nTPM
Mouse:52.4 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.8
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
2621 Female, age 67, right hemisphere 42.2
2148 Female, age 91, left hemisphere 31.8
1911 Female, age 85, right hemisphere 27.1
1898 Male, age 80, left hemisphere 15.5
2529 Female, age 94, left hemisphere 10.9
1855 Male, age 76, left hemisphere 9.4
Dentate gyrus
nTPM: 22.4
2531 Female, age 67, both hemispheres 52.9
1927 Female, age 91, both hemispheres 34.1
2246 Female, age 85, both hemispheres 19.8
2528 Male, age 74, both hemispheres 13.9
2530 Female, age 94, left hemisphere 9.6
2010 Male, age 76, both hemispheres 4.2
Entorhinal gyrus
nTPM: 21.4
2613 Female, age 94, left hemisphere 39.5
1938 Female, age 85, left hemisphere 23.0
2764 Male, age 80, right hemisphere 22.6
2686 Male, age 75, right hemisphere 21.3
1787 Male, age 76, left hemisphere 18.5
2117 Female, age 91, right hemisphere 3.4
Hippocampus, CA1
nTPM: 27.7
2749 Male, age 80, left hemisphere 60.7
2527 Male, age 74, both hemispheres 25.1
1873 Female, age 85, both hemispheres 19.1
2082 Female, age 91, right hemisphere 18.6
2045 Male, age 76, both hemispheres 15.2
Hippocampus, CA2
nTPM: 15.8
2113 Female, age 91, right hemisphere 19.4
1963 Male, age 80, left hemisphere 19.0
2249 Male, age 74, both hemispheres 16.2
1892 Male, age 76, both hemispheres 14.0
2437 Female, age 94, left hemisphere 13.5
1940 Female, age 85, left hemisphere 12.8
Hippocampus, CA3
nTPM: 35.8
2620 Female, age 94, left hemisphere 65.4
2137 Male, age 80, left hemisphere 62.6
2861 Female, age 67, both hemispheres 53.6
1867 Male, age 76, both hemispheres 11.7
2436 Male, age 74, both hemispheres 11.5
1891 Female, age 85, both hemispheres 10.1
Parahippocampal cortex
nTPM: 22.0
2245 Female, age 91, both hemispheres 42.0
2622 Female, age 67, right hemisphere 34.3
2693 Female, age 94, both hemispheres 26.1
2250 Female, age 67, right hemisphere 24.3
1933 Female, age 85, both hemispheres 19.1
1850 Male, age 80, both hemispheres 18.5
2532 Female, age 72, left hemisphere 18.4
1990 Female, age 91, right hemisphere 15.4
2692 Male, age 74, both hemispheres 12.6
2018 Male, age 76, both hemispheres 9.0
Perirhinal gyrus
nTPM: 24.6
1847 Female, age 91, left hemisphere 30.5
2521 Female, age 94, right hemisphere 29.9
1794 Male, age 80, right hemisphere 26.2
1841 Female, age 85, right hemisphere 21.2
2848 Male, age 76, right hemisphere 15.3
Subiculum
nTPM: 11.8
1901 Male, age 80, both hemispheres 20.2
2729 Female, age 91, right hemisphere 12.7
1977 Female, age 85, both hemispheres 12.3
2619 Male, age 74, both hemispheres 10.9
2042 Male, age 76, both hemispheres 7.9
2438 Female, age 94, left hemisphere 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.1
Samples: 197

Max nTPM: 73.3
Min nTPM: 2.8
Std nTPM: 16.8
Median nTPM: 32.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 73.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 70.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 67.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 67.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 66.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 65.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 65.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 64.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 64.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 64.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 63.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10169-103B7 60 years, female 38.7
FF:10153-102I9 76 years, female 36.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.7
Samples: 4

Max nTPM: 54.6
Min nTPM: 38.1
Sample A Female 54.6
Sample B Female 54.5
Sample C Male 38.1
Sample D Male 47.5
Entorhinal cortex
nTPM: 57.4
Samples: 4

Max nTPM: 63.7
Min nTPM: 48.2
Sample A Female 63.7
Sample B Female 48.2
Sample C Male 59.7
Sample D Male 58.0
Subiculum
nTPM: 35.0
Samples: 4

Max nTPM: 42.3
Min nTPM: 30.8
Sample A Female 42.3
Sample B Female 30.8
Sample C Male 34.1
Sample D Male 32.8
Ventral hippocampus
nTPM: 43.0
Samples: 4

Max nTPM: 69.4
Min nTPM: 31.4
Sample A Female 31.4
Sample B Female 31.8
Sample C Male 39.4
Sample D Male 69.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.6
Samples: 4

Max nTPM: 55.8
Min nTPM: 44.3
Sample A Male 55.8
Sample B Male 50.2
Sample C Female 44.3
Sample D Female 52.2
Hippocampal formation
nTPM: 52.4
Samples: 4

Max nTPM: 57.5
Min nTPM: 47.1
Sample A Male 50.8
Sample B Male 57.5
Sample C Female 54.2
Sample D Female 47.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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