HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.3 nTPM
HPA:15.3 nTPM
GTEx:15.5 nTPM
FANTOM5:60.9 Scaled Tags Per Million
Pig:7.2 nTPM
Mouse:18.5 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035059Antibody HPA035060
Glial cells Not detectedHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
2529 Female, age 94, left hemisphere 15.0
2621 Female, age 67, right hemisphere 15.0
1898 Male, age 80, left hemisphere 14.8
1855 Male, age 76, left hemisphere 14.7
1911 Female, age 85, right hemisphere 14.7
2148 Female, age 91, left hemisphere 14.6
Dentate gyrus
nTPM: 14.4
2010 Male, age 76, both hemispheres 14.8
2246 Female, age 85, both hemispheres 14.8
2530 Female, age 94, left hemisphere 14.8
1927 Female, age 91, both hemispheres 14.4
2531 Female, age 67, both hemispheres 14.0
2528 Male, age 74, both hemispheres 13.7
Entorhinal gyrus
nTPM: 14.7
2686 Male, age 75, right hemisphere 15.1
1938 Female, age 85, left hemisphere 15.0
2117 Female, age 91, right hemisphere 14.9
2613 Female, age 94, left hemisphere 14.7
2764 Male, age 80, right hemisphere 14.5
1787 Male, age 76, left hemisphere 14.3
Hippocampus, CA1
nTPM: 14.6
2527 Male, age 74, both hemispheres 15.1
2749 Male, age 80, left hemisphere 15.1
1873 Female, age 85, both hemispheres 15.0
2082 Female, age 91, right hemisphere 14.0
2045 Male, age 76, both hemispheres 13.5
Hippocampus, CA2
nTPM: 14.6
1892 Male, age 76, both hemispheres 15.4
1940 Female, age 85, left hemisphere 14.6
1963 Male, age 80, left hemisphere 14.6
2437 Female, age 94, left hemisphere 14.6
2113 Female, age 91, right hemisphere 14.3
2249 Male, age 74, both hemispheres 14.0
Hippocampus, CA3
nTPM: 14.6
1891 Female, age 85, both hemispheres 15.1
1867 Male, age 76, both hemispheres 15.0
2137 Male, age 80, left hemisphere 15.0
2620 Female, age 94, left hemisphere 14.3
2861 Female, age 67, both hemispheres 14.2
2436 Male, age 74, both hemispheres 14.1
Parahippocampal cortex
nTPM: 15.3
1850 Male, age 80, both hemispheres 16.0
2692 Male, age 74, both hemispheres 16.0
2532 Female, age 72, left hemisphere 15.8
2245 Female, age 91, both hemispheres 15.7
1990 Female, age 91, right hemisphere 15.4
1933 Female, age 85, both hemispheres 15.1
2018 Male, age 76, both hemispheres 14.9
2622 Female, age 67, right hemisphere 14.9
2693 Female, age 94, both hemispheres 14.8
2250 Female, age 67, right hemisphere 14.6
Perirhinal gyrus
nTPM: 15.1
1841 Female, age 85, right hemisphere 15.4
1794 Male, age 80, right hemisphere 15.2
2521 Female, age 94, right hemisphere 15.2
1847 Female, age 91, left hemisphere 14.9
2848 Male, age 76, right hemisphere 14.8
Subiculum
nTPM: 15.3
2438 Female, age 94, left hemisphere 17.1
1901 Male, age 80, both hemispheres 15.6
2042 Male, age 76, both hemispheres 15.5
1977 Female, age 85, both hemispheres 15.1
2619 Male, age 74, both hemispheres 14.7
2729 Female, age 91, right hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 29.6
Min nTPM: 8.9
Std nTPM: 2.9
Median nTPM: 14.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 25.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 24.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 22.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 22.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 21.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 21.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 21.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 21.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.9
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 50.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.2
Sample A Female 8.1
Sample B Female 7.0
Sample C Male 7.3
Sample D Male 6.2
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.2
Sample A Female 5.4
Sample B Female 6.0
Sample C Male 5.3
Sample D Male 5.2
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.4
Sample A Female 7.5
Sample B Female 5.4
Sample C Male 6.3
Sample D Male 6.3
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.5
Sample A Female 7.6
Sample B Female 5.5
Sample C Male 5.5
Sample D Male 7.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.5
Sample A Male 13.5
Sample B Male 14.7
Sample C Female 16.1
Sample D Female 11.5
Hippocampal formation
nTPM: 18.5
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.6
Sample A Male 21.1
Sample B Male 19.4
Sample C Female 16.6
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69262337 Antisense, RP_050303_02_B07, Mouse strain C57BL/6J (56 days, male) 3.1

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