HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.5 nTPM
HPA:70.5 nTPM
GTEx:74.2 nTPM
FANTOM5:28.0 Scaled Tags Per Million
Pig:42.3 nTPM
Mouse:42.6 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055490Antibody CAB034338
Glial cells MediumHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.5
Sample id Sample description nTPM
Hippocampus
nTPM: 68.5
1898 Male, age 80, left hemisphere 72.1
2621 Female, age 67, right hemisphere 71.6
1911 Female, age 85, right hemisphere 68.2
1855 Male, age 76, left hemisphere 68.1
2529 Female, age 94, left hemisphere 67.2
2148 Female, age 91, left hemisphere 64.1
Dentate gyrus
nTPM: 68.6
1927 Female, age 91, both hemispheres 70.2
2010 Male, age 76, both hemispheres 70.0
2531 Female, age 67, both hemispheres 68.2
2246 Female, age 85, both hemispheres 68.1
2530 Female, age 94, left hemisphere 67.8
2528 Male, age 74, both hemispheres 66.9
Entorhinal gyrus
nTPM: 68.8
1787 Male, age 76, left hemisphere 70.6
1938 Female, age 85, left hemisphere 70.6
2764 Male, age 80, right hemisphere 68.7
2613 Female, age 94, left hemisphere 68.5
2117 Female, age 91, right hemisphere 67.5
2686 Male, age 75, right hemisphere 67.0
Hippocampus, CA1
nTPM: 69.8
2749 Male, age 80, left hemisphere 72.7
2045 Male, age 76, both hemispheres 70.7
1873 Female, age 85, both hemispheres 70.3
2527 Male, age 74, both hemispheres 69.6
2082 Female, age 91, right hemisphere 65.9
Hippocampus, CA2
nTPM: 68.7
1892 Male, age 76, both hemispheres 71.9
2249 Male, age 74, both hemispheres 71.0
1940 Female, age 85, left hemisphere 68.0
2113 Female, age 91, right hemisphere 67.6
2437 Female, age 94, left hemisphere 67.4
1963 Male, age 80, left hemisphere 66.3
Hippocampus, CA3
nTPM: 70.0
2436 Male, age 74, both hemispheres 71.6
1867 Male, age 76, both hemispheres 71.2
2137 Male, age 80, left hemisphere 70.3
2620 Female, age 94, left hemisphere 70.0
2861 Female, age 67, both hemispheres 69.2
1891 Female, age 85, both hemispheres 67.9
Parahippocampal cortex
nTPM: 68.6
2532 Female, age 72, left hemisphere 70.1
2018 Male, age 76, both hemispheres 69.8
2250 Female, age 67, right hemisphere 69.3
1933 Female, age 85, both hemispheres 69.2
1850 Male, age 80, both hemispheres 69.1
2245 Female, age 91, both hemispheres 69.0
2693 Female, age 94, both hemispheres 68.6
2692 Male, age 74, both hemispheres 67.8
1990 Female, age 91, right hemisphere 67.7
2622 Female, age 67, right hemisphere 66.0
Perirhinal gyrus
nTPM: 70.5
1794 Male, age 80, right hemisphere 71.8
1847 Female, age 91, left hemisphere 71.3
2848 Male, age 76, right hemisphere 71.3
1841 Female, age 85, right hemisphere 69.6
2521 Female, age 94, right hemisphere 68.6
Subiculum
nTPM: 68.8
2042 Male, age 76, both hemispheres 71.0
1977 Female, age 85, both hemispheres 70.5
1901 Male, age 80, both hemispheres 69.3
2619 Male, age 74, both hemispheres 68.6
2438 Female, age 94, left hemisphere 66.9
2729 Female, age 91, right hemisphere 66.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.2
Samples: 197

Max nTPM: 168.3
Min nTPM: 49.0
Std nTPM: 17.0
Median nTPM: 71.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 168.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 133.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 130.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 127.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 122.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 121.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 118.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 117.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 110.6
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 108.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 103.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.0
FF:10169-103B7 60 years, female 28.2
FF:10153-102I9 76 years, female 27.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 55.6
Min nTPM: 35.5
Sample A Female 55.6
Sample B Female 35.5
Sample C Male 42.4
Sample D Male 35.6
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 36.0
Min nTPM: 28.8
Sample A Female 36.0
Sample B Female 35.2
Sample C Male 28.8
Sample D Male 30.0
Subiculum
nTPM: 33.6
Samples: 4

Max nTPM: 41.3
Min nTPM: 30.6
Sample A Female 41.3
Sample B Female 30.7
Sample C Male 31.6
Sample D Male 30.6
Ventral hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 38.4
Min nTPM: 29.0
Sample A Female 38.4
Sample B Female 29.0
Sample C Male 36.0
Sample D Male 37.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.9
Samples: 4

Max nTPM: 44.5
Min nTPM: 34.7
Sample A Male 39.0
Sample B Male 44.5
Sample C Female 41.3
Sample D Female 34.7
Hippocampal formation
nTPM: 42.6
Samples: 4

Max nTPM: 46.9
Min nTPM: 39.2
Sample A Male 43.8
Sample B Male 40.5
Sample C Female 39.2
Sample D Female 46.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
69079981 Antisense, RP_050324_01_A08, Mouse strain C57BL/6J (56 days, male) 10.7

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