COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.3 nTPM
HPA:9.0 nTPM
GTEx:16.3 nTPM
FANTOM5:33.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA025924
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Low



COLON - HPA RNA-seqi
Average nTPM 9.0
overview
Male, age 54 		Colon sample 67
nTPM: 12
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 12.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 11.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 11.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 9.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 11.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 9.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 5.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 16.3
Samples: 373

Max nTPM: 44.5
Min nTPM: 5.8
Std nTPM: 6.0
Median nTPM: 15.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 44.5
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 37.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 34.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 34.6
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 33.8
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 30.3
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 29.2
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 29.0
GTEX-1HSMO-2526-SM-A9SKP 60-69 years, male 28.6
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 28.4
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 28.3
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Colon - Transverse
Average nTPM: 14.9
Samples: 406

Max nTPM: 51.8
Min nTPM: 4.0
Std nTPM: 6.2
Median nTPM: 13.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 51.8
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 40.6
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 37.5
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 34.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 33.0
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 32.7
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 32.5
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 32.3
GTEX-Q734-1126-SM-48TZY 40-49 years, female 31.7
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 31.1
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 31.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 33.4
FF:10014-101C5 62,83,84 years, mixed 33.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.