HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:178.2 nTPM
HPA:178.2 nTPM
GTEx:133.7 nTPM
FANTOM5:147.4 Scaled Tags Per Million
Pig:139.8 nTPM
Mouse:141.0 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030131Antibody HPA030132Antibody HPA030133Antibody HPA030134
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells LowHighLowMedium








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 178.2
Sample id Sample description nTPM
Hippocampus
nTPM: 148.4
1898 Male, age 80, left hemisphere 162.1
2148 Female, age 91, left hemisphere 153.0
2621 Female, age 67, right hemisphere 147.7
2529 Female, age 94, left hemisphere 147.4
1855 Male, age 76, left hemisphere 140.9
1911 Female, age 85, right hemisphere 139.4
Dentate gyrus
nTPM: 151.5
1927 Female, age 91, both hemispheres 166.2
2530 Female, age 94, left hemisphere 156.4
2010 Male, age 76, both hemispheres 149.2
2531 Female, age 67, both hemispheres 148.7
2528 Male, age 74, both hemispheres 147.8
2246 Female, age 85, both hemispheres 140.9
Entorhinal gyrus
nTPM: 163.4
2764 Male, age 80, right hemisphere 176.9
2613 Female, age 94, left hemisphere 172.7
1787 Male, age 76, left hemisphere 167.9
1938 Female, age 85, left hemisphere 165.2
2686 Male, age 75, right hemisphere 154.2
2117 Female, age 91, right hemisphere 143.7
Hippocampus, CA1
nTPM: 157.2
2749 Male, age 80, left hemisphere 195.6
2527 Male, age 74, both hemispheres 151.2
1873 Female, age 85, both hemispheres 148.8
2082 Female, age 91, right hemisphere 145.3
2045 Male, age 76, both hemispheres 145.0
Hippocampus, CA2
nTPM: 156.6
1892 Male, age 76, both hemispheres 176.0
1963 Male, age 80, left hemisphere 166.9
2437 Female, age 94, left hemisphere 154.1
2113 Female, age 91, right hemisphere 148.6
2249 Male, age 74, both hemispheres 147.9
1940 Female, age 85, left hemisphere 146.4
Hippocampus, CA3
nTPM: 155.7
2137 Male, age 80, left hemisphere 179.9
1867 Male, age 76, both hemispheres 160.8
2861 Female, age 67, both hemispheres 160.1
2620 Female, age 94, left hemisphere 147.2
2436 Male, age 74, both hemispheres 146.6
1891 Female, age 85, both hemispheres 139.7
Parahippocampal cortex
nTPM: 160.3
1850 Male, age 80, both hemispheres 177.1
1990 Female, age 91, right hemisphere 165.6
2532 Female, age 72, left hemisphere 165.5
2622 Female, age 67, right hemisphere 163.0
2245 Female, age 91, both hemispheres 161.4
1933 Female, age 85, both hemispheres 160.9
2693 Female, age 94, both hemispheres 155.4
2250 Female, age 67, right hemisphere 153.1
2692 Male, age 74, both hemispheres 152.1
2018 Male, age 76, both hemispheres 148.5
Perirhinal gyrus
nTPM: 178.2
1794 Male, age 80, right hemisphere 192.5
1847 Female, age 91, left hemisphere 186.5
1841 Female, age 85, right hemisphere 176.5
2521 Female, age 94, right hemisphere 169.0
2848 Male, age 76, right hemisphere 166.4
Subiculum
nTPM: 147.7
1977 Female, age 85, both hemispheres 157.7
1901 Male, age 80, both hemispheres 156.0
2619 Male, age 74, both hemispheres 150.4
2438 Female, age 94, left hemisphere 146.2
2729 Female, age 91, right hemisphere 141.2
2042 Male, age 76, both hemispheres 134.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 133.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 133.7
Samples: 197

Max nTPM: 310.5
Min nTPM: 31.9
Std nTPM: 47.4
Median nTPM: 129.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 310.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 285.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 270.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 255.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 243.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 241.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 233.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 230.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 229.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 221.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 210.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.4
FF:10169-103B7 60 years, female 174.7
FF:10153-102I9 76 years, female 120.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 139.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 139.8
Samples: 4

Max nTPM: 178.6
Min nTPM: 113.4
Sample A Female 178.6
Sample B Female 144.8
Sample C Male 113.4
Sample D Male 122.4
Entorhinal cortex
nTPM: 126.8
Samples: 4

Max nTPM: 139.1
Min nTPM: 114.2
Sample A Female 139.1
Sample B Female 135.1
Sample C Male 118.6
Sample D Male 114.2
Subiculum
nTPM: 97.2
Samples: 4

Max nTPM: 133.4
Min nTPM: 81.3
Sample A Female 133.4
Sample B Female 88.7
Sample C Male 85.4
Sample D Male 81.3
Ventral hippocampus
nTPM: 115.7
Samples: 4

Max nTPM: 144.4
Min nTPM: 80.6
Sample A Female 111.6
Sample B Female 80.6
Sample C Male 126.2
Sample D Male 144.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 141.1
Samples: 4

Max nTPM: 148.8
Min nTPM: 137.2
Sample A Male 138.7
Sample B Male 148.8
Sample C Female 137.2
Sample D Female 139.6
Hippocampal formation
nTPM: 127.5
Samples: 4

Max nTPM: 132.7
Min nTPM: 125.2
Sample A Male 132.7
Sample B Male 125.2
Sample C Female 126.4
Sample D Female 125.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
68637491 Antisense, RP_050126_01_A06, Mouse strain C57BL/6J (56 days, male) 13.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.