HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.9 nTPM
HPA:57.9 nTPM
GTEx:54.2 nTPM
FANTOM5:90.2 Scaled Tags Per Million
Pig:100.9 nTPM
Mouse:214.0 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018139Antibody HPA058537
Glial cells LowMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.9
Sample id Sample description nTPM
Hippocampus
nTPM: 47.2
1898 Male, age 80, left hemisphere 56.2
1855 Male, age 76, left hemisphere 49.6
2621 Female, age 67, right hemisphere 48.0
1911 Female, age 85, right hemisphere 45.7
2148 Female, age 91, left hemisphere 42.3
2529 Female, age 94, left hemisphere 41.2
Dentate gyrus
nTPM: 47.1
1927 Female, age 91, both hemispheres 54.1
2010 Male, age 76, both hemispheres 50.4
2528 Male, age 74, both hemispheres 49.6
2530 Female, age 94, left hemisphere 43.7
2246 Female, age 85, both hemispheres 42.8
2531 Female, age 67, both hemispheres 42.2
Entorhinal gyrus
nTPM: 47.7
2764 Male, age 80, right hemisphere 52.6
2613 Female, age 94, left hemisphere 49.6
1787 Male, age 76, left hemisphere 48.8
1938 Female, age 85, left hemisphere 47.3
2117 Female, age 91, right hemisphere 45.8
2686 Male, age 75, right hemisphere 42.0
Hippocampus, CA1
nTPM: 52.4
2749 Male, age 80, left hemisphere 72.9
2527 Male, age 74, both hemispheres 49.7
1873 Female, age 85, both hemispheres 47.5
2082 Female, age 91, right hemisphere 47.2
2045 Male, age 76, both hemispheres 44.7
Hippocampus, CA2
nTPM: 52.0
2249 Male, age 74, both hemispheres 61.8
1892 Male, age 76, both hemispheres 58.8
1963 Male, age 80, left hemisphere 53.4
1940 Female, age 85, left hemisphere 46.0
2113 Female, age 91, right hemisphere 46.0
2437 Female, age 94, left hemisphere 45.8
Hippocampus, CA3
nTPM: 55.0
2436 Male, age 74, both hemispheres 82.7
2137 Male, age 80, left hemisphere 63.2
1867 Male, age 76, both hemispheres 54.0
2620 Female, age 94, left hemisphere 47.1
1891 Female, age 85, both hemispheres 45.5
2861 Female, age 67, both hemispheres 37.6
Parahippocampal cortex
nTPM: 48.5
1850 Male, age 80, both hemispheres 59.7
1990 Female, age 91, right hemisphere 51.9
2693 Female, age 94, both hemispheres 49.3
2245 Female, age 91, both hemispheres 48.9
2250 Female, age 67, right hemisphere 48.5
1933 Female, age 85, both hemispheres 48.3
2532 Female, age 72, left hemisphere 47.2
2018 Male, age 76, both hemispheres 47.0
2692 Male, age 74, both hemispheres 43.6
2622 Female, age 67, right hemisphere 40.8
Perirhinal gyrus
nTPM: 57.9
1794 Male, age 80, right hemisphere 64.4
1847 Female, age 91, left hemisphere 61.3
1841 Female, age 85, right hemisphere 57.2
2521 Female, age 94, right hemisphere 55.3
2848 Male, age 76, right hemisphere 51.1
Subiculum
nTPM: 46.9
1901 Male, age 80, both hemispheres 53.7
1977 Female, age 85, both hemispheres 50.3
2619 Male, age 74, both hemispheres 46.5
2042 Male, age 76, both hemispheres 45.7
2729 Female, age 91, right hemisphere 42.6
2438 Female, age 94, left hemisphere 42.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.2
Samples: 197

Max nTPM: 103.2
Min nTPM: 26.4
Std nTPM: 16.6
Median nTPM: 50.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 103.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 101.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 98.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 98.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 91.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 91.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 90.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 89.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 84.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 84.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 84.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.2
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 76.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 100.9
Samples: 4

Max nTPM: 122.6
Min nTPM: 75.4
Sample A Female 122.6
Sample B Female 103.8
Sample C Male 101.9
Sample D Male 75.4
Entorhinal cortex
nTPM: 88.7
Samples: 4

Max nTPM: 102.1
Min nTPM: 75.6
Sample A Female 94.4
Sample B Female 102.1
Sample C Male 82.6
Sample D Male 75.6
Subiculum
nTPM: 90.0
Samples: 4

Max nTPM: 110.3
Min nTPM: 82.5
Sample A Female 110.3
Sample B Female 83.6
Sample C Male 83.7
Sample D Male 82.5
Ventral hippocampus
nTPM: 95.5
Samples: 4

Max nTPM: 116.3
Min nTPM: 68.7
Sample A Female 112.6
Sample B Female 68.7
Sample C Male 116.3
Sample D Male 84.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 214.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 198.2
Samples: 4

Max nTPM: 218.3
Min nTPM: 190.3
Sample A Male 193.6
Sample B Male 190.4
Sample C Female 190.3
Sample D Female 218.3
Hippocampal formation
nTPM: 214.1
Samples: 4

Max nTPM: 234.4
Min nTPM: 200.0
Sample A Male 200.0
Sample B Male 214.4
Sample C Female 234.4
Sample D Female 207.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
76115728 Antisense, RP_060620_02_B07, Mouse strain C57BL/6J (56 days, male) 17.0
69734500 Antisense, RP_050503_01_A09, Mouse strain C57BL/6J (56 days, male) 14.9

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The Human Protein Atlas

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