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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:200.4 nTPM
FANTOM5:176.6 Scaled Tags Per Million
Pig:21.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA054359
Glial cells Not detected
Neuronal cells Medium

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 200.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 200.4
Samples: 246

Max nTPM: 496.2
Min nTPM: 95.2
Std nTPM: 58.2
Median nTPM: 188.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 496.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 465.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 436.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 432.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 412.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 377.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 338.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 322.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 316.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 315.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 314.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 298.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 298.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 297.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 293.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 292.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 290.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 284.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 275.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 273.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 265.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 263.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 262.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 262.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 261.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 259.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 259.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 259.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 258.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 258.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 256.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 251.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 251.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 250.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 250.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 249.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 249.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 246.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 246.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 245.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 244.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 240.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 240.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 240.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 237.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 237.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 236.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 235.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 234.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 233.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 233.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 232.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 230.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 230.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 230.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 229.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 229.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 227.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 227.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 227.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 226.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 225.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 223.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 222.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 221.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 221.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 221.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 220.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 220.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 219.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 219.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 219.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 217.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 216.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 216.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 214.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 214.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 213.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 213.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 212.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 211.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 211.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 210.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 210.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 210.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 209.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 209.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 208.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 205.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 204.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 204.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 204.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 202.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 202.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 201.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 200.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 199.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 199.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 198.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 198.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 198.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 198.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 197.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 197.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 197.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 196.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 195.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 193.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 193.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 192.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 192.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 191.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 191.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 191.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 191.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 190.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 190.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 190.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 190.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 190.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 189.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 188.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 188.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 188.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 187.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 187.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 187.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 186.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 186.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 186.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 185.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 185.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 184.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 184.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 183.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 183.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 183.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 183.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 183.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 182.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 182.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 181.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 180.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 180.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 180.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 180.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 179.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 179.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 179.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 178.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 177.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 177.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 177.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 177.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 176.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 176.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 175.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 175.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 175.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 175.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 174.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 174.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 174.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 174.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 174.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 173.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 173.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 173.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 172.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 172.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 172.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 172.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 171.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 171.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 171.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 170.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 170.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 170.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 170.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 169.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 169.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 169.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 167.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 167.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 167.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 166.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 166.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 166.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 165.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 164.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 163.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 163.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 162.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 162.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 161.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 161.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 161.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 160.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 160.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 157.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 157.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 157.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 155.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 154.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 154.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 153.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 153.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 153.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 152.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 150.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 149.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 149.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 149.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 149.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 147.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 147.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 147.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 147.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 147.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 146.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 145.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 145.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 145.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 141.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 136.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 135.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 135.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 134.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 131.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 129.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 127.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 126.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 124.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 123.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 123.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 123.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 123.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 120.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 119.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 117.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 117.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 116.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 116.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 115.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 115.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 95.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 176.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 176.6
FF:10164-103B2 76 years, female 176.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 21.2
Pig sample Sample description nTPM
Caudate
nTPM: 21.3
Samples: 4

Max nTPM: 25.2
Min nTPM: 19.2
Sample A Female 20.2
Sample B Female 20.4
Sample C Male 25.2
Sample D Male 19.2

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