HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.1 nTPM
HPA:39.1 nTPM
GTEx:40.4 nTPM
FANTOM5:127.9 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:56.9 nTPM
Allen mouse:14.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022793Antibody HPA070752
Glial cells HighMedium
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.1
Sample id Sample description nTPM
Hippocampus
nTPM: 36.7
2621 Female, age 67, right hemisphere 39.6
2148 Female, age 91, left hemisphere 38.5
2529 Female, age 94, left hemisphere 38.5
1898 Male, age 80, left hemisphere 37.4
1855 Male, age 76, left hemisphere 35.2
1911 Female, age 85, right hemisphere 30.8
Dentate gyrus
nTPM: 36.3
2531 Female, age 67, both hemispheres 41.9
2530 Female, age 94, left hemisphere 40.6
1927 Female, age 91, both hemispheres 35.7
2010 Male, age 76, both hemispheres 34.9
2246 Female, age 85, both hemispheres 33.5
2528 Male, age 74, both hemispheres 31.1
Entorhinal gyrus
nTPM: 37.7
2613 Female, age 94, left hemisphere 39.5
1787 Male, age 76, left hemisphere 39.1
2764 Male, age 80, right hemisphere 38.9
1938 Female, age 85, left hemisphere 38.3
2686 Male, age 75, right hemisphere 37.8
2117 Female, age 91, right hemisphere 32.8
Hippocampus, CA1
nTPM: 37.1
2749 Male, age 80, left hemisphere 45.7
1873 Female, age 85, both hemispheres 36.6
2045 Male, age 76, both hemispheres 35.8
2527 Male, age 74, both hemispheres 35.0
2082 Female, age 91, right hemisphere 32.3
Hippocampus, CA2
nTPM: 34.8
1892 Male, age 76, both hemispheres 42.6
2437 Female, age 94, left hemisphere 36.0
1940 Female, age 85, left hemisphere 34.2
1963 Male, age 80, left hemisphere 32.9
2113 Female, age 91, right hemisphere 32.7
2249 Male, age 74, both hemispheres 30.1
Hippocampus, CA3
nTPM: 37.6
2861 Female, age 67, both hemispheres 45.4
2620 Female, age 94, left hemisphere 41.9
2137 Male, age 80, left hemisphere 39.5
1867 Male, age 76, both hemispheres 36.8
2436 Male, age 74, both hemispheres 31.8
1891 Female, age 85, both hemispheres 30.4
Parahippocampal cortex
nTPM: 36.5
2245 Female, age 91, both hemispheres 41.2
2622 Female, age 67, right hemisphere 40.2
2532 Female, age 72, left hemisphere 39.7
1850 Male, age 80, both hemispheres 38.9
1933 Female, age 85, both hemispheres 35.4
2250 Female, age 67, right hemisphere 34.6
1990 Female, age 91, right hemisphere 34.3
2693 Female, age 94, both hemispheres 34.0
2692 Male, age 74, both hemispheres 33.5
2018 Male, age 76, both hemispheres 33.0
Perirhinal gyrus
nTPM: 39.1
1794 Male, age 80, right hemisphere 42.5
1847 Female, age 91, left hemisphere 40.5
1841 Female, age 85, right hemisphere 39.5
2848 Male, age 76, right hemisphere 37.3
2521 Female, age 94, right hemisphere 35.9
Subiculum
nTPM: 33.0
1977 Female, age 85, both hemispheres 35.9
2619 Male, age 74, both hemispheres 33.9
1901 Male, age 80, both hemispheres 32.8
2438 Female, age 94, left hemisphere 32.8
2042 Male, age 76, both hemispheres 31.7
2729 Female, age 91, right hemisphere 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.4
Samples: 197

Max nTPM: 146.3
Min nTPM: 22.1
Std nTPM: 11.9
Median nTPM: 38.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 146.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 74.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 65.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 61.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 61.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 58.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 57.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 57.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 57.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 55.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.9
FF:10169-103B7 60 years, female 129.7
FF:10153-102I9 76 years, female 126.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 27.4
Min nTPM: 19.1
Sample A Female 27.4
Sample B Female 21.2
Sample C Male 23.3
Sample D Male 19.1
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.9
Sample A Female 19.1
Sample B Female 17.9
Sample C Male 17.5
Sample D Male 16.9
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 26.7
Min nTPM: 17.3
Sample A Female 26.7
Sample B Female 18.6
Sample C Male 19.4
Sample D Male 17.3
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 26.3
Min nTPM: 16.3
Sample A Female 19.9
Sample B Female 16.3
Sample C Male 26.3
Sample D Male 22.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.9
Samples: 4

Max nTPM: 57.1
Min nTPM: 56.6
Sample A Male 57.0
Sample B Male 56.6
Sample C Female 57.1
Sample D Female 57.0
Hippocampal formation
nTPM: 56.2
Samples: 4

Max nTPM: 59.9
Min nTPM: 52.2
Sample A Male 53.9
Sample B Male 52.2
Sample C Female 58.8
Sample D Female 59.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
68203445 Antisense, RP_041018_01_C04, Mouse strain C57BL/6J (56 days, male) 14.7
67870080 Antisense, RP_041018_01_C04, Mouse strain C57BL/6J (56 days, male) 14.4

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The Human Protein Atlas

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