COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.8 nTPM
HPA:12.5 nTPM
GTEx:13.8 nTPM
FANTOM5:21.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA009300Antibody HPA012368
Endothelial cells HighHigh
Glandular cells Not detectedNot detected
Peripheral nerve/ganglion Not detectedMedium





COLON - HPA RNA-seqi
Average nTPM 12.5
overview
Male, age 54 		Colon sample 67
nTPM: 9.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 11.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 8.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 18
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 17.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 14.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 13.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 11.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 11.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 14.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 13.3
Samples: 373

Max nTPM: 59.0
Min nTPM: 3.6
Std nTPM: 7.8
Median nTPM: 11.2
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 59.0
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 49.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 45.0
GTEX-144GM-1126-SM-79OJK 20-29 years, male 44.3
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 42.4
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 41.1
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 40.0
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 39.8
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 39.8
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 38.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 34.8
Show allShow less
Colon - Transverse
Average nTPM: 13.8
Samples: 406

Max nTPM: 115.3
Min nTPM: 3.3
Std nTPM: 10.7
Median nTPM: 10.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 115.3
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 71.5
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 56.2
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 53.1
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 47.8
GTEX-1J1OQ-2726-SM-AHZ3R 40-49 years, female 47.5
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 45.4
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 44.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 41.3
GTEX-17F98-1026-SM-7IGO8 40-49 years, female 40.1
GTEX-1JMPZ-2426-SM-C1YQP 30-39 years, male 38.9
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 21.3
FF:10014-101C5 62,83,84 years, mixed 21.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.