COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:56.9 nTPM
HPA:21.4 nTPM
GTEx:56.9 nTPM
FANTOM5:86.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB011626
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Medium


COLON - HPA RNA-seqi
Average nTPM 21.4
overview
Male, age 54 		Colon sample 67
nTPM: 24.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 21.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 25
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 28.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 23
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 15.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 17.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 17.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 22.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 14.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 22.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 22.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 56.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 56.9
Samples: 373

Max nTPM: 97.8
Min nTPM: 26.4
Std nTPM: 12.0
Median nTPM: 56.1
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 97.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 92.2
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 91.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 88.6
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 86.6
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 86.1
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 85.7
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 84.2
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 82.4
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 82.4
GTEX-1B996-2726-SM-7DUGG 60-69 years, male 81.9
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Colon - Transverse
Average nTPM: 42.3
Samples: 406

Max nTPM: 85.3
Min nTPM: 16.9
Std nTPM: 10.3
Median nTPM: 40.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 85.3
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 82.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 82.6
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 80.6
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 76.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 74.0
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 73.6
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 70.8
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 70.2
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 65.9
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 65.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 86.1
FF:10014-101C5 62,83,84 years, mixed 86.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.