HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.2 nTPM
HPA:22.2 nTPM
GTEx:24.7 nTPM
FANTOM5:19.1 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:19.2 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006625
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
2148 Female, age 91, left hemisphere 23.1
1855 Male, age 76, left hemisphere 21.6
1898 Male, age 80, left hemisphere 20.4
2621 Female, age 67, right hemisphere 20.2
1911 Female, age 85, right hemisphere 19.8
2529 Female, age 94, left hemisphere 18.4
Dentate gyrus
nTPM: 20.9
2530 Female, age 94, left hemisphere 23.3
2531 Female, age 67, both hemispheres 22.7
2010 Male, age 76, both hemispheres 21.9
1927 Female, age 91, both hemispheres 20.7
2528 Male, age 74, both hemispheres 18.6
2246 Female, age 85, both hemispheres 18.3
Entorhinal gyrus
nTPM: 19.5
2613 Female, age 94, left hemisphere 20.5
2686 Male, age 75, right hemisphere 20.4
2764 Male, age 80, right hemisphere 20.1
1787 Male, age 76, left hemisphere 19.3
2117 Female, age 91, right hemisphere 19.3
1938 Female, age 85, left hemisphere 17.3
Hippocampus, CA1
nTPM: 21.4
2749 Male, age 80, left hemisphere 27.0
2045 Male, age 76, both hemispheres 21.8
1873 Female, age 85, both hemispheres 20.2
2527 Male, age 74, both hemispheres 19.6
2082 Female, age 91, right hemisphere 18.6
Hippocampus, CA2
nTPM: 20.1
1963 Male, age 80, left hemisphere 25.2
1892 Male, age 76, both hemispheres 23.1
2437 Female, age 94, left hemisphere 20.3
2113 Female, age 91, right hemisphere 19.1
2249 Male, age 74, both hemispheres 17.1
1940 Female, age 85, left hemisphere 15.5
Hippocampus, CA3
nTPM: 22.2
2620 Female, age 94, left hemisphere 29.7
2861 Female, age 67, both hemispheres 26.5
2137 Male, age 80, left hemisphere 22.7
1867 Male, age 76, both hemispheres 21.2
2436 Male, age 74, both hemispheres 16.6
1891 Female, age 85, both hemispheres 16.4
Parahippocampal cortex
nTPM: 18.3
2622 Female, age 67, right hemisphere 21.1
2018 Male, age 76, both hemispheres 19.1
1933 Female, age 85, both hemispheres 18.9
2245 Female, age 91, both hemispheres 18.8
2532 Female, age 72, left hemisphere 18.4
2250 Female, age 67, right hemisphere 18.3
2692 Male, age 74, both hemispheres 18.3
2693 Female, age 94, both hemispheres 18.1
1990 Female, age 91, right hemisphere 16.9
1850 Male, age 80, both hemispheres 15.1
Perirhinal gyrus
nTPM: 17.5
1794 Male, age 80, right hemisphere 18.5
2521 Female, age 94, right hemisphere 17.8
2848 Male, age 76, right hemisphere 17.7
1847 Female, age 91, left hemisphere 17.2
1841 Female, age 85, right hemisphere 16.2
Subiculum
nTPM: 18.1
2042 Male, age 76, both hemispheres 19.4
2729 Female, age 91, right hemisphere 18.8
2619 Male, age 74, both hemispheres 18.2
1901 Male, age 80, both hemispheres 17.9
1977 Female, age 85, both hemispheres 17.4
2438 Female, age 94, left hemisphere 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.7
Samples: 197

Max nTPM: 47.3
Min nTPM: 11.3
Std nTPM: 7.2
Median nTPM: 23.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 47.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 45.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 44.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 42.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 41.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 41.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 41.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 40.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 36.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.1
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.4
Sample A Female 12.7
Sample B Female 10.9
Sample C Male 9.6
Sample D Male 8.4
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.7
Sample A Female 9.1
Sample B Female 9.0
Sample C Male 10.6
Sample D Male 8.7
Subiculum
nTPM: 9.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.9
Sample A Female 10.9
Sample B Female 8.2
Sample C Male 10.0
Sample D Male 7.9
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 13.0
Min nTPM: 7.2
Sample A Female 10.3
Sample B Female 7.2
Sample C Male 13.0
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 18.8
Min nTPM: 16.8
Sample A Male 18.6
Sample B Male 18.5
Sample C Female 16.8
Sample D Female 18.8
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.3
Sample A Male 15.3
Sample B Male 19.4
Sample C Female 20.7
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
576439 Antisense, RP_040831_02_A03, Mouse strain C57BL/6J (56 days, male) 6.0

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