HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.1 nTPM
HPA:18.1 nTPM
GTEx:42.8 nTPM
FANTOM5:74.8 Scaled Tags Per Million
Pig:36.8 nTPM
Mouse:63.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026092Antibody CAB011687
Glial cells HighHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.1
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1898 Male, age 80, left hemisphere 18.3
1855 Male, age 76, left hemisphere 17.3
2529 Female, age 94, left hemisphere 17.3
1911 Female, age 85, right hemisphere 17.2
2148 Female, age 91, left hemisphere 17.1
2621 Female, age 67, right hemisphere 16.8
Dentate gyrus
nTPM: 17.7
2010 Male, age 76, both hemispheres 19.3
1927 Female, age 91, both hemispheres 18.4
2246 Female, age 85, both hemispheres 18.2
2530 Female, age 94, left hemisphere 17.3
2531 Female, age 67, both hemispheres 16.9
2528 Male, age 74, both hemispheres 16.2
Entorhinal gyrus
nTPM: 17.6
2117 Female, age 91, right hemisphere 19.1
1938 Female, age 85, left hemisphere 18.0
1787 Male, age 76, left hemisphere 17.5
2686 Male, age 75, right hemisphere 17.4
2764 Male, age 80, right hemisphere 17.4
2613 Female, age 94, left hemisphere 16.2
Hippocampus, CA1
nTPM: 17.8
1873 Female, age 85, both hemispheres 18.5
2045 Male, age 76, both hemispheres 18.4
2527 Male, age 74, both hemispheres 17.5
2749 Male, age 80, left hemisphere 17.4
2082 Female, age 91, right hemisphere 17.3
Hippocampus, CA2
nTPM: 17.0
2113 Female, age 91, right hemisphere 17.9
1892 Male, age 76, both hemispheres 17.6
2249 Male, age 74, both hemispheres 16.9
1940 Female, age 85, left hemisphere 16.8
1963 Male, age 80, left hemisphere 16.6
2437 Female, age 94, left hemisphere 16.4
Hippocampus, CA3
nTPM: 16.8
1891 Female, age 85, both hemispheres 19.6
2137 Male, age 80, left hemisphere 18.9
1867 Male, age 76, both hemispheres 17.3
2436 Male, age 74, both hemispheres 16.3
2620 Female, age 94, left hemisphere 14.7
2861 Female, age 67, both hemispheres 14.3
Parahippocampal cortex
nTPM: 17.8
1850 Male, age 80, both hemispheres 20.1
2532 Female, age 72, left hemisphere 19.0
1933 Female, age 85, both hemispheres 18.5
2018 Male, age 76, both hemispheres 18.5
1990 Female, age 91, right hemisphere 17.5
2245 Female, age 91, both hemispheres 17.1
2692 Male, age 74, both hemispheres 17.1
2250 Female, age 67, right hemisphere 17.0
2693 Female, age 94, both hemispheres 17.0
2622 Female, age 67, right hemisphere 15.6
Perirhinal gyrus
nTPM: 18.1
1841 Female, age 85, right hemisphere 19.7
1794 Male, age 80, right hemisphere 19.0
2848 Male, age 76, right hemisphere 18.7
1847 Female, age 91, left hemisphere 16.9
2521 Female, age 94, right hemisphere 16.1
Subiculum
nTPM: 18.1
1901 Male, age 80, both hemispheres 19.8
1977 Female, age 85, both hemispheres 19.7
2042 Male, age 76, both hemispheres 18.4
2438 Female, age 94, left hemisphere 17.4
2619 Male, age 74, both hemispheres 17.0
2729 Female, age 91, right hemisphere 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.8
Samples: 197

Max nTPM: 66.5
Min nTPM: 14.4
Std nTPM: 9.8
Median nTPM: 43.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 66.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 65.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 65.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 64.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 62.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 61.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 60.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 60.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 59.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 56.6
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 56.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.8
FF:10153-102I9 76 years, female 82.7
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.8
Samples: 4

Max nTPM: 42.6
Min nTPM: 33.3
Sample A Female 42.6
Sample B Female 33.3
Sample C Male 37.2
Sample D Male 34.0
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 33.2
Min nTPM: 29.0
Sample A Female 31.8
Sample B Female 33.2
Sample C Male 31.2
Sample D Male 29.0
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 40.9
Min nTPM: 31.4
Sample A Female 40.9
Sample B Female 33.1
Sample C Male 32.4
Sample D Male 31.4
Ventral hippocampus
nTPM: 33.8
Samples: 4

Max nTPM: 35.8
Min nTPM: 31.5
Sample A Female 35.8
Sample B Female 31.5
Sample C Male 32.3
Sample D Male 35.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.0
Samples: 4

Max nTPM: 67.1
Min nTPM: 59.3
Sample A Male 59.5
Sample B Male 62.1
Sample C Female 59.3
Sample D Female 67.1
Hippocampal formation
nTPM: 63.3
Samples: 4

Max nTPM: 69.0
Min nTPM: 57.8
Sample A Male 64.6
Sample B Male 69.0
Sample C Female 61.8
Sample D Female 57.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71723961 Antisense, RP_050921_01_C03, Mouse strain C57BL/6J (56 days, male) 0.0

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