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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 374.5
Min nTPM: 108.6
Std nTPM: 54.7
Median nTPM:
177_1
74 years, male
374.5
243_1
75 years, male
373.2
375_1
74 years, female
371.2
153_1
70 years, female
370.1
322_1
76 years, male
368.8
163_1
78 years, male
368.3
321_1
62 years, female
366.4
386_1
76 years, male
353.9
319_1
81 years, male
350.1
229_1
69 years, female
347.0
189_1
76 years, male
344.1
452_1
88 years, female
343.6
172_1
72 years, female
342.0
379_1
60 years, male
337.3
425_1
59 years, female
332.8
4_1
88 years, female
332.4
447_1
81 years, male
325.3
6_1
73 years, female
325.2
377_1
82 years, female
324.9
173_1
67 years, male
323.9
237_1
82 years, male
317.5
404_1
82 years, female
316.2
405_1
91 years, male
313.8
17_1
71 years, male
313.5
218_1
71 years, female
308.3
376_1
75 years, female
308.3
396_1
62 years, male
307.4
265_1
87 years, male
306.5
480_1
63 years, male
306.2
506_1
65 years, male
304.2
350_1
84 years, female
303.9
266_1
85 years, male
302.2
347_1
72 years, male
301.2
354_1
81 years, female
300.7
389_1
86 years, female
300.7
352_1
62 years, male
300.6
246_1
77 years, male
295.9
254_1
77 years, female
295.2
394_1
75 years, female
295.1
142_1
61 years, female
294.7
384_1
83 years, male
294.5
335_1
73 years, female
294.1
115_1
83 years, male
291.8
320_1
89 years, female
290.8
35_1
74 years, female
289.5
518_1
75 years, female
287.5
286_1
68 years, female
287.4
145_1
84 years, male
287.0
316_1
62 years, male
286.1
406_1
79 years, male
285.4
293_1
68 years, female
285.1
99_1
64 years, male
284.8
313_1
79 years, female
284.5
468_1
89 years, male
284.1
41_1
94 years, female
283.2
264_1
73 years, female
281.7
2_1
77 years, female
281.5
109_1
81 years, female
280.3
517_1
88 years, male
280.3
120_1
70 years, female
277.8
137_1
83 years, male
277.7
217_1
76 years, male
276.0
351_1
91 years, male
275.1
349_1
83 years, male
273.5
318_1
68 years, male
273.0
499_1
55 years, female
272.7
526_1
61 years, male
271.4
355_1
70 years, female
267.4
18_1
88 years, male
264.0
317_1
60 years, male
261.4
126_1
63 years, male
260.9
81_1
67 years, male
258.8
356_1
87 years, female
258.6
162_1
79 years, female
255.0
414_1
84 years, female
254.3
9_1
66 years, female
249.2
295_1
61 years, female
247.8
324_1
76 years, male
247.3
117_1
61 years, male
245.2
315_1
62 years, female
243.6
251_1
78 years, male
243.2
353_1
82 years, female
242.9
503_1
68 years, male
238.2
307_1
66 years, female
236.7
308_1
70 years, female
234.8
42_1
85 years, male
231.7
291_1
76 years, male
230.4
139_1
64 years, female
223.9
288_1
66 years, female
220.1
119_1
70 years, female
218.7
495_1
57 years, female
218.3
292_1
71 years, male
216.9
348_1
84 years, male
209.4
314_1
67 years, male
203.5
413_1
59 years, female
201.3
311_1
78 years, male
198.2
501_1
88 years, male
192.3
466_1
57 years, female
185.8
32_1
67 years, male
185.7
415_1
77 years, female
184.3
89_1
63 years, male
181.0
43_1
64 years, female
167.2
490_1
67 years, female
125.6
149_1
88 years, male
117.5
491_1
89 years, female
108.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.