HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:65.7 nTPM
HPA:65.7 nTPM
GTEx:82.6 nTPM
FANTOM5:22.4 Scaled Tags Per Million
Pig:75.1 nTPM
Mouse:189.2 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069769Antibody CAB022550
Glial cells Not detectedLow
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.7
Sample id Sample description nTPM
Hippocampus
nTPM: 61.6
1898 Male, age 80, left hemisphere 65.1
2621 Female, age 67, right hemisphere 62.2
1911 Female, age 85, right hemisphere 62.1
1855 Male, age 76, left hemisphere 61.0
2148 Female, age 91, left hemisphere 60.1
2529 Female, age 94, left hemisphere 59.2
Dentate gyrus
nTPM: 63.4
2530 Female, age 94, left hemisphere 68.3
1927 Female, age 91, both hemispheres 64.7
2010 Male, age 76, both hemispheres 64.6
2246 Female, age 85, both hemispheres 62.4
2528 Male, age 74, both hemispheres 61.5
2531 Female, age 67, both hemispheres 58.9
Entorhinal gyrus
nTPM: 61.4
1938 Female, age 85, left hemisphere 63.0
2764 Male, age 80, right hemisphere 62.0
1787 Male, age 76, left hemisphere 61.5
2117 Female, age 91, right hemisphere 61.4
2613 Female, age 94, left hemisphere 61.1
2686 Male, age 75, right hemisphere 59.5
Hippocampus, CA1
nTPM: 65.7
2749 Male, age 80, left hemisphere 79.7
1873 Female, age 85, both hemispheres 63.9
2527 Male, age 74, both hemispheres 63.9
2082 Female, age 91, right hemisphere 61.4
2045 Male, age 76, both hemispheres 59.8
Hippocampus, CA2
nTPM: 64.0
1892 Male, age 76, both hemispheres 69.0
1963 Male, age 80, left hemisphere 68.7
2249 Male, age 74, both hemispheres 66.7
2437 Female, age 94, left hemisphere 65.6
2113 Female, age 91, right hemisphere 58.2
1940 Female, age 85, left hemisphere 55.9
Hippocampus, CA3
nTPM: 63.9
2137 Male, age 80, left hemisphere 71.9
1867 Male, age 76, both hemispheres 67.8
2620 Female, age 94, left hemisphere 62.9
2436 Male, age 74, both hemispheres 62.1
1891 Female, age 85, both hemispheres 60.8
2861 Female, age 67, both hemispheres 57.8
Parahippocampal cortex
nTPM: 60.0
2245 Female, age 91, both hemispheres 62.3
1933 Female, age 85, both hemispheres 62.1
2250 Female, age 67, right hemisphere 62.1
2532 Female, age 72, left hemisphere 60.9
1990 Female, age 91, right hemisphere 60.8
2018 Male, age 76, both hemispheres 60.1
1850 Male, age 80, both hemispheres 59.1
2692 Male, age 74, both hemispheres 58.9
2693 Female, age 94, both hemispheres 58.4
2622 Female, age 67, right hemisphere 55.5
Perirhinal gyrus
nTPM: 60.6
1847 Female, age 91, left hemisphere 64.7
1794 Male, age 80, right hemisphere 63.1
1841 Female, age 85, right hemisphere 60.9
2521 Female, age 94, right hemisphere 57.9
2848 Male, age 76, right hemisphere 56.6
Subiculum
nTPM: 61.8
1901 Male, age 80, both hemispheres 65.9
1977 Female, age 85, both hemispheres 64.5
2042 Male, age 76, both hemispheres 61.4
2438 Female, age 94, left hemisphere 61.1
2619 Male, age 74, both hemispheres 59.8
2729 Female, age 91, right hemisphere 58.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 82.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 82.6
Samples: 197

Max nTPM: 192.1
Min nTPM: 43.5
Std nTPM: 18.8
Median nTPM: 79.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 192.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 148.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 135.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 130.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 125.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 121.0
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 120.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 118.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 116.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 113.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 111.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.4
FF:10153-102I9 76 years, female 28.2
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.1
Samples: 4

Max nTPM: 96.0
Min nTPM: 56.7
Sample A Female 96.0
Sample B Female 75.8
Sample C Male 71.9
Sample D Male 56.7
Entorhinal cortex
nTPM: 59.2
Samples: 4

Max nTPM: 64.7
Min nTPM: 47.1
Sample A Female 64.7
Sample B Female 61.2
Sample C Male 63.9
Sample D Male 47.1
Subiculum
nTPM: 66.2
Samples: 4

Max nTPM: 83.9
Min nTPM: 59.5
Sample A Female 83.9
Sample B Female 59.9
Sample C Male 61.4
Sample D Male 59.5
Ventral hippocampus
nTPM: 73.0
Samples: 4

Max nTPM: 87.9
Min nTPM: 52.8
Sample A Female 77.8
Sample B Female 52.8
Sample C Male 87.9
Sample D Male 73.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 189.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 167.1
Samples: 4

Max nTPM: 183.2
Min nTPM: 149.8
Sample A Male 149.8
Sample B Male 166.1
Sample C Female 183.2
Sample D Female 169.2
Hippocampal formation
nTPM: 189.1
Samples: 4

Max nTPM: 207.5
Min nTPM: 176.8
Sample A Male 207.5
Sample B Male 184.6
Sample C Female 176.8
Sample D Female 187.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
75695659 Antisense, RP_060518_04_C10, Mouse strain C57BL/6J (56 days, male) 1.7

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