HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:58.5 nTPM
HPA:58.5 nTPM
GTEx:41.5 nTPM
FANTOM5:88.4 Scaled Tags Per Million
Mouse:37.7 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036084Antibody CAB003808
Glial cells Not detectedNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.5
Sample id Sample description nTPM
Hippocampus
nTPM: 49.9
2148 Female, age 91, left hemisphere 68.9
2621 Female, age 67, right hemisphere 59.7
1855 Male, age 76, left hemisphere 51.0
1898 Male, age 80, left hemisphere 42.4
2529 Female, age 94, left hemisphere 40.0
1911 Female, age 85, right hemisphere 37.1
Dentate gyrus
nTPM: 49.6
2531 Female, age 67, both hemispheres 86.3
2246 Female, age 85, both hemispheres 47.7
1927 Female, age 91, both hemispheres 47.6
2528 Male, age 74, both hemispheres 45.1
2530 Female, age 94, left hemisphere 36.2
2010 Male, age 76, both hemispheres 34.7
Entorhinal gyrus
nTPM: 47.9
2686 Male, age 75, right hemisphere 56.6
2764 Male, age 80, right hemisphere 51.3
2117 Female, age 91, right hemisphere 49.7
1938 Female, age 85, left hemisphere 47.6
1787 Male, age 76, left hemisphere 43.4
2613 Female, age 94, left hemisphere 39.0
Hippocampus, CA1
nTPM: 56.0
2045 Male, age 76, both hemispheres 72.6
2082 Female, age 91, right hemisphere 70.5
2749 Male, age 80, left hemisphere 50.3
2527 Male, age 74, both hemispheres 47.9
1873 Female, age 85, both hemispheres 38.8
Hippocampus, CA2
nTPM: 40.5
2113 Female, age 91, right hemisphere 66.3
1940 Female, age 85, left hemisphere 40.9
2249 Male, age 74, both hemispheres 37.4
2437 Female, age 94, left hemisphere 34.8
1892 Male, age 76, both hemispheres 34.2
1963 Male, age 80, left hemisphere 29.3
Hippocampus, CA3
nTPM: 57.9
2861 Female, age 67, both hemispheres 98.4
2620 Female, age 94, left hemisphere 90.1
2137 Male, age 80, left hemisphere 55.1
2436 Male, age 74, both hemispheres 36.3
1891 Female, age 85, both hemispheres 35.7
1867 Male, age 76, both hemispheres 32.0
Parahippocampal cortex
nTPM: 48.1
2245 Female, age 91, both hemispheres 66.5
2622 Female, age 67, right hemisphere 60.5
2693 Female, age 94, both hemispheres 52.1
1850 Male, age 80, both hemispheres 50.0
1933 Female, age 85, both hemispheres 45.0
2250 Female, age 67, right hemisphere 44.7
2532 Female, age 72, left hemisphere 43.6
2018 Male, age 76, both hemispheres 42.6
1990 Female, age 91, right hemisphere 40.6
2692 Male, age 74, both hemispheres 36.0
Perirhinal gyrus
nTPM: 58.5
1794 Male, age 80, right hemisphere 72.9
1847 Female, age 91, left hemisphere 59.0
2521 Female, age 94, right hemisphere 58.4
2848 Male, age 76, right hemisphere 57.6
1841 Female, age 85, right hemisphere 44.5
Subiculum
nTPM: 38.4
2729 Female, age 91, right hemisphere 64.8
1977 Female, age 85, both hemispheres 36.7
1901 Male, age 80, both hemispheres 35.6
2619 Male, age 74, both hemispheres 33.1
2042 Male, age 76, both hemispheres 31.9
2438 Female, age 94, left hemisphere 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.5
Samples: 197

Max nTPM: 153.0
Min nTPM: 7.4
Std nTPM: 24.2
Median nTPM: 34.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 153.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 112.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 107.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 106.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 96.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 96.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 94.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 93.1
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 89.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 88.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 85.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.4
FF:10153-102I9 76 years, female 92.1
FF:10169-103B7 60 years, female 84.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.5
Samples: 4

Max nTPM: 33.8
Min nTPM: 33.2
Sample A Male 33.8
Sample B Male 33.2
Sample C Female 33.3
Sample D Female 33.7
Hippocampal formation
nTPM: 37.7
Samples: 4

Max nTPM: 39.1
Min nTPM: 36.0
Sample A Male 36.9
Sample B Male 38.6
Sample C Female 39.1
Sample D Female 36.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
2186 Antisense, RP_Baylor_102754, Mouse strain C57BL/6J (56 days, male) 3.0
2185 Antisense, RP_Baylor_102754, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.