HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.0 nTPM
HPA:18.0 nTPM
GTEx:19.4 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:14.2 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 16.1
2621 Female, age 67, right hemisphere 18.1
1855 Male, age 76, left hemisphere 16.7
1911 Female, age 85, right hemisphere 16.2
2529 Female, age 94, left hemisphere 15.8
2148 Female, age 91, left hemisphere 15.5
1898 Male, age 80, left hemisphere 14.3
Dentate gyrus
nTPM: 15.9
2531 Female, age 67, both hemispheres 17.3
2528 Male, age 74, both hemispheres 16.8
2246 Female, age 85, both hemispheres 15.6
2530 Female, age 94, left hemisphere 15.6
2010 Male, age 76, both hemispheres 15.3
1927 Female, age 91, both hemispheres 14.5
Entorhinal gyrus
nTPM: 16.9
2613 Female, age 94, left hemisphere 17.8
2764 Male, age 80, right hemisphere 17.4
2117 Female, age 91, right hemisphere 17.3
1787 Male, age 76, left hemisphere 16.5
2686 Male, age 75, right hemisphere 16.5
1938 Female, age 85, left hemisphere 15.8
Hippocampus, CA1
nTPM: 15.1
2527 Male, age 74, both hemispheres 15.9
1873 Female, age 85, both hemispheres 15.7
2082 Female, age 91, right hemisphere 15.5
2045 Male, age 76, both hemispheres 14.1
2749 Male, age 80, left hemisphere 14.0
Hippocampus, CA2
nTPM: 15.4
2437 Female, age 94, left hemisphere 16.8
1940 Female, age 85, left hemisphere 16.3
1963 Male, age 80, left hemisphere 15.4
2113 Female, age 91, right hemisphere 15.0
2249 Male, age 74, both hemispheres 14.6
1892 Male, age 76, both hemispheres 14.3
Hippocampus, CA3
nTPM: 16.0
1891 Female, age 85, both hemispheres 17.9
2620 Female, age 94, left hemisphere 16.6
2861 Female, age 67, both hemispheres 16.3
2137 Male, age 80, left hemisphere 15.7
1867 Male, age 76, both hemispheres 14.9
2436 Male, age 74, both hemispheres 14.8
Parahippocampal cortex
nTPM: 16.4
2622 Female, age 67, right hemisphere 18.5
2532 Female, age 72, left hemisphere 18.4
2692 Male, age 74, both hemispheres 17.4
2693 Female, age 94, both hemispheres 16.6
1850 Male, age 80, both hemispheres 16.4
2018 Male, age 76, both hemispheres 16.3
1990 Female, age 91, right hemisphere 16.2
2245 Female, age 91, both hemispheres 14.9
2250 Female, age 67, right hemisphere 14.9
1933 Female, age 85, both hemispheres 14.7
Perirhinal gyrus
nTPM: 15.3
1794 Male, age 80, right hemisphere 16.3
1841 Female, age 85, right hemisphere 15.8
2848 Male, age 76, right hemisphere 15.4
1847 Female, age 91, left hemisphere 14.8
2521 Female, age 94, right hemisphere 14.4
Subiculum
nTPM: 18.0
2438 Female, age 94, left hemisphere 21.8
2042 Male, age 76, both hemispheres 19.9
2619 Male, age 74, both hemispheres 18.6
1901 Male, age 80, both hemispheres 16.3
1977 Female, age 85, both hemispheres 16.3
2729 Female, age 91, right hemisphere 15.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 47.3
Min nTPM: 8.4
Std nTPM: 6.3
Median nTPM: 18.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 47.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 41.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 39.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 35.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 35.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 34.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 33.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 32.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 31.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 31.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10153-102I9 76 years, female 36.0
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.1
Sample A Female 19.3
Sample B Female 18.1
Sample C Male 17.4
Sample D Male 13.1
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 18.5
Min nTPM: 15.0
Sample A Female 18.5
Sample B Female 15.0
Sample C Male 17.8
Sample D Male 15.3
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.6
Sample A Female 20.7
Sample B Female 15.7
Sample C Male 17.1
Sample D Male 14.6
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 24.0
Min nTPM: 14.2
Sample A Female 16.8
Sample B Female 14.2
Sample C Male 24.0
Sample D Male 18.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.0
Sample A Male 13.5
Sample B Male 14.2
Sample C Female 12.0
Sample D Female 13.9
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 17.7
Min nTPM: 10.1
Sample A Male 12.7
Sample B Male 16.3
Sample C Female 17.7
Sample D Female 10.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69173481 Antisense, RP_050329_01_F06, Mouse strain C57BL/6J (56 days, male) 2.1
71161399 Antisense, RP_050810_01_C02, Mouse strain C57BL/6J (56 days, male) 0.0

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