AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		65.160
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.8 nTPM
HPA:20.8 nTPM
GTEx:20.6 nTPM
FANTOM5:48.1 Scaled Tags Per Million
Pig:29.0 nTPM
Mouse:124.1 nTPM
Allen mouse:10.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA048583
Amygdala mean intensity 65.160
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 57.302
Basal lateral amygdala* 57.457
Basal lateral amygdaloid nucleus -
Cortical amygdala 65.160
Central amygdala 41.152
Medial amygdaloid nucleus 62.955

AMYGDALA - HPA Brain RNA-seq
Max nTPM 20.8
Sample id Sample description nTPM
Amygdala
nTPM: 12.6
1987 Female, age 91, left hemisphere 19.9
2517 Female, age 94, left hemisphere 13.6
2814 Male, age 76, right hemisphere 12.0
2514 Male, age 75, right hemisphere 11.1
2695 Female, age 67, right hemisphere 6.4
Basal amygdala
nTPM: 12.6
2243 Female, age 91, right hemisphere 18.4
2685 Female, age 94, left hemisphere 14.7
2110 Male, age 80, left hemisphere 13.6
1955 Male, age 76, both hemispheres 11.4
2609 Male, age 75, right hemisphere 10.9
2827 Female, age 67, right hemisphere 6.8
Central amygdala
nTPM: 15.1
2701 Female, age 91, right hemisphere 20.9
2239 Male, age 80, left hemisphere 16.9
1905 Male, age 76, both hemispheres 12.8
2515 Male, age 75, right hemisphere 12.5
2826 Female, age 94, left hemisphere 12.5
Corticomedial amygdala
nTPM: 15.8
2242 Female, age 91, right hemisphere 22.5
2829 Male, age 80, left hemisphere 21.9
2429 Female, age 94, left hemisphere 15.4
2240 Male, age 76, both hemispheres 14.1
2428 Male, age 75, right hemisphere 11.1
2535 Female, age 67, right hemisphere 9.8
Lateral amygdala
nTPM: 11.9
2255 Female, age 91, right hemisphere 19.3
2534 Female, age 94, left hemisphere 14.5
1883 Male, age 76, both hemispheres 11.8
2516 Male, age 75, right hemisphere 10.5
2256 Male, age 80, left hemisphere 9.7
2830 Female, age 67, right hemisphere 5.6
Stria terminalis, bed nucleus
nTPM: 20.8
2201 Male, age 74, unknown 24.5
2486 Female, age 94, both hemispheres 19.5
1974 Female, age 91, both hemispheres 18.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 20.6
Samples: 152

Max nTPM: 49.8
Min nTPM: 2.6
Std nTPM: 9.2
Median nTPM: 18.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 49.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 47.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 45.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 45.1
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 44.4
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 41.9
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 36.8
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 36.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 36.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 36.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 35.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 48.1
FF:10151-102I7 76 years, female 48.1

AMYGDALA - Pig RNA-seqi
Average nTPM 29.0
Pig sample Sample description nTPM
Amygdala
nTPM: 29.0
Samples: 4

Max nTPM: 48.4
Min nTPM: 18.1
Sample A Female 48.4
Sample B Female 19.5
Sample C Male 18.1
Sample D Male 30.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 124.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 124.1
Samples: 4

Max nTPM: 136.6
Min nTPM: 100.5
Sample A Male 136.6
Sample B Male 128.1
Sample C Female 100.5
Sample D Female 131.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.4
71587898 Antisense, RP_050725_03_G02, Mouse strain C57BL/6J (56 days, male) 10.5
68845550 Antisense, RP_050224_02_A05, Mouse strain C57BL/6J (56 days, male) 10.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.