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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:128.5 nTPM
FANTOM5:443.6 Scaled Tags Per Million
Pig:107.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA009433Antibody HPA009696Antibody CAB004738
Glial cells HighMediumHigh
Neuronal cells HighMedium-






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 128.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 128.5
Samples: 246

Max nTPM: 218.9
Min nTPM: 85.6
Std nTPM: 22.9
Median nTPM: 125.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 218.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 202.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 200.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 198.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 195.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 192.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 188.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 179.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 175.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 175.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 174.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 172.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 172.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 167.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 166.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 166.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 161.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 161.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 160.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 160.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 159.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 159.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 159.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 157.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 156.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 156.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 156.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 155.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 154.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 153.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 152.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 152.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 151.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 150.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 150.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 150.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 150.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 150.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 149.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 148.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 148.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 147.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 147.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 147.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 147.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 146.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 146.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 146.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 145.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 145.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 144.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 144.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 144.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 143.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 143.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 143.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 143.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 142.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 142.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 142.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 142.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 141.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 141.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 141.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 141.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 141.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 141.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 140.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 139.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 138.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 138.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 138.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 138.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 138.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 137.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 137.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 137.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 137.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 136.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 136.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 136.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 135.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 135.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 135.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 135.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 135.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 134.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 134.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 134.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 134.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 133.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 133.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 133.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 133.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 132.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 132.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 132.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 132.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 131.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 131.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 131.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 130.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 130.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 130.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 130.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 129.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 129.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 129.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 129.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 129.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 128.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 128.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 128.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 127.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 127.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 127.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 127.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 127.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 127.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 126.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 126.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 125.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 125.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 125.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 125.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 125.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 125.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 124.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 124.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 123.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 123.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 123.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 123.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 123.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 123.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 122.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 122.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 122.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 122.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 122.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 121.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 121.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 121.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 120.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 120.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 120.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 119.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 119.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 119.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 118.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 118.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 118.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 118.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 118.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 118.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 118.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 117.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 117.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 117.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 117.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 116.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 116.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 116.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 116.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 115.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 115.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 115.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 115.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 114.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 114.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 114.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 114.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 113.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 113.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 113.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 113.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 112.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 112.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 111.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 110.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 110.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 110.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 109.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 109.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 109.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 108.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 108.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 108.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 108.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 108.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 107.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 107.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 107.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 107.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 107.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 107.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 107.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 107.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 107.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 106.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 106.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 106.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 106.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 105.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 105.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 105.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 105.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 105.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 105.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 105.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 104.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 104.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 103.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 103.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 103.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 103.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 102.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 102.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 102.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 102.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 101.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 101.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 101.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 101.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 101.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 100.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 99.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 99.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 99.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 98.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 95.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 95.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 95.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 94.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 94.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 93.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 92.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 89.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 88.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 87.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 85.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 443.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 443.6
FF:10164-103B2 76 years, female 443.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 107.3
Pig sample Sample description nTPM
Caudate
nTPM: 107.3
Samples: 4

Max nTPM: 115.0
Min nTPM: 102.1
Sample A Female 109.6
Sample B Female 102.5
Sample C Male 115.0
Sample D Male 102.1

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