HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:49.5 nTPM
HPA:49.5 nTPM
GTEx:49.7 nTPM
FANTOM5:39.3 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:61.2 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 46.6
1855 Male, age 76, left hemisphere 51.4
1911 Female, age 85, right hemisphere 47.3
2529 Female, age 94, left hemisphere 46.2
1898 Male, age 80, left hemisphere 45.7
2148 Female, age 91, left hemisphere 44.8
2621 Female, age 67, right hemisphere 44.0
Dentate gyrus
nTPM: 47.6
2010 Male, age 76, both hemispheres 54.4
2246 Female, age 85, both hemispheres 50.3
2528 Male, age 74, both hemispheres 48.4
2530 Female, age 94, left hemisphere 45.2
1927 Female, age 91, both hemispheres 44.7
2531 Female, age 67, both hemispheres 42.4
Entorhinal gyrus
nTPM: 42.6
1787 Male, age 76, left hemisphere 48.0
2117 Female, age 91, right hemisphere 45.8
1938 Female, age 85, left hemisphere 44.2
2686 Male, age 75, right hemisphere 40.6
2764 Male, age 80, right hemisphere 38.9
2613 Female, age 94, left hemisphere 37.9
Hippocampus, CA1
nTPM: 47.3
2045 Male, age 76, both hemispheres 53.9
1873 Female, age 85, both hemispheres 49.2
2527 Male, age 74, both hemispheres 47.7
2082 Female, age 91, right hemisphere 43.9
2749 Male, age 80, left hemisphere 42.0
Hippocampus, CA2
nTPM: 45.0
1940 Female, age 85, left hemisphere 49.6
2113 Female, age 91, right hemisphere 46.7
2249 Male, age 74, both hemispheres 45.8
2437 Female, age 94, left hemisphere 44.5
1892 Male, age 76, both hemispheres 42.7
1963 Male, age 80, left hemisphere 40.4
Hippocampus, CA3
nTPM: 45.3
2436 Male, age 74, both hemispheres 50.9
1891 Female, age 85, both hemispheres 48.4
1867 Male, age 76, both hemispheres 46.9
2137 Male, age 80, left hemisphere 42.9
2620 Female, age 94, left hemisphere 41.6
2861 Female, age 67, both hemispheres 40.8
Parahippocampal cortex
nTPM: 45.1
2018 Male, age 76, both hemispheres 56.8
1933 Female, age 85, both hemispheres 48.6
1850 Male, age 80, both hemispheres 44.8
2693 Female, age 94, both hemispheres 44.3
2692 Male, age 74, both hemispheres 44.2
2250 Female, age 67, right hemisphere 44.0
2532 Female, age 72, left hemisphere 43.5
1990 Female, age 91, right hemisphere 43.1
2245 Female, age 91, both hemispheres 42.6
2622 Female, age 67, right hemisphere 39.3
Perirhinal gyrus
nTPM: 44.2
2848 Male, age 76, right hemisphere 47.5
1841 Female, age 85, right hemisphere 45.5
2521 Female, age 94, right hemisphere 45.0
1847 Female, age 91, left hemisphere 42.3
1794 Male, age 80, right hemisphere 40.6
Subiculum
nTPM: 49.5
2042 Male, age 76, both hemispheres 59.2
2438 Female, age 94, left hemisphere 55.6
2729 Female, age 91, right hemisphere 48.2
1901 Male, age 80, both hemispheres 46.1
2619 Male, age 74, both hemispheres 44.9
1977 Female, age 85, both hemispheres 42.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.7
Samples: 197

Max nTPM: 94.3
Min nTPM: 25.2
Std nTPM: 12.1
Median nTPM: 47.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 94.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 93.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 93.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 85.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 81.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 81.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 80.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 77.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 74.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 71.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 71.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.3
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 31.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 25.9
Min nTPM: 18.1
Sample A Female 25.9
Sample B Female 22.1
Sample C Male 21.5
Sample D Male 18.1
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.5
Sample A Female 18.4
Sample B Female 20.0
Sample C Male 20.0
Sample D Male 16.5
Subiculum
nTPM: 20.6
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.4
Sample A Female 21.7
Sample B Female 19.4
Sample C Male 18.4
Sample D Male 22.9
Ventral hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 24.4
Min nTPM: 18.3
Sample A Female 24.4
Sample B Female 18.3
Sample C Male 18.7
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.2
Samples: 4

Max nTPM: 66.5
Min nTPM: 55.5
Sample A Male 55.5
Sample B Male 66.5
Sample C Female 63.8
Sample D Female 59.1
Hippocampal formation
nTPM: 61.0
Samples: 4

Max nTPM: 69.3
Min nTPM: 56.2
Sample A Male 69.3
Sample B Male 58.6
Sample C Female 60.0
Sample D Female 56.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
74819347 Antisense, RP_060315_02_F02, Mouse strain C57BL/6J (56 days, male) 1.1
68845586 Antisense, RP_050224_02_B02, Mouse strain C57BL/6J (56 days, male) 0.8

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