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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:166.8 nTPM
FANTOM5:115.0 Scaled Tags Per Million
Pig:166.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB004528Antibody CAB009326
Glial cells Not detectedNot detected
Neuronal cells HighMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 166.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 166.8
Samples: 246

Max nTPM: 381.1
Min nTPM: 63.8
Std nTPM: 56.2
Median nTPM: 158.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 381.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 372.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 367.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 346.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 342.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 311.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 297.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 284.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 283.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 276.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 267.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 267.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 263.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 262.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 259.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 257.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 255.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 253.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 250.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 250.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 244.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 244.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 240.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 239.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 239.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 238.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 238.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 237.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 237.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 232.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 232.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 226.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 225.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 222.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 220.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 220.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 219.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 217.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 216.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 213.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 213.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 213.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 213.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 211.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 210.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 209.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 208.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 208.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 207.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 207.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 206.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 205.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 205.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 204.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 202.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 202.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 202.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 202.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 202.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 201.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 201.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 201.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 199.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 197.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 197.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 196.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 193.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 192.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 192.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 191.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 190.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 190.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 189.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 188.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 187.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 187.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 186.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 186.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 185.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 185.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 184.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 183.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 182.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 181.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 180.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 180.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 180.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 180.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 179.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 179.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 178.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 178.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 176.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 176.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 176.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 175.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 174.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 173.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 173.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 172.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 171.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 170.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 170.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 169.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 168.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 168.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 167.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 166.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 166.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 165.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 164.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 164.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 162.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 161.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 161.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 161.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 160.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 160.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 160.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 160.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 159.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 159.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 159.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 158.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 157.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 157.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 157.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 156.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 156.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 156.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 156.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 156.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 156.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 155.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 155.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 154.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 154.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 154.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 153.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 152.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 152.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 152.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 152.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 152.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 150.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 150.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 149.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 148.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 147.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 145.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 145.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 143.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 143.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 142.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 141.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 141.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 140.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 140.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 140.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 140.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 139.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 138.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 138.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 138.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 137.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 137.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 137.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 137.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 136.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 134.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 133.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 133.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 132.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 131.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 130.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 130.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 129.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 129.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 129.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 129.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 128.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 127.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 125.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 125.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 125.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 124.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 123.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 123.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 122.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 122.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 121.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 121.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 120.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 120.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 119.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 119.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 118.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 117.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 117.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 116.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 116.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 115.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 115.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 114.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 114.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 114.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 114.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 114.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 113.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 112.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 111.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 109.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 109.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 107.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 106.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 106.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 106.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 105.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 103.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 102.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 100.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 98.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 98.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 98.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 97.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 96.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 95.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 95.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 95.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 93.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 92.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 90.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 88.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 88.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 85.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 84.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 83.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 81.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 80.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 75.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 69.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 63.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 115.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 115.0
FF:10164-103B2 76 years, female 115.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 166.3
Pig sample Sample description nTPM
Caudate
nTPM: 166.3
Samples: 4

Max nTPM: 202.0
Min nTPM: 137.5
Sample A Female 137.5
Sample B Female 176.4
Sample C Male 202.0
Sample D Male 149.4

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