HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:156.5 nTPM
HPA:156.5 nTPM
GTEx:358.0 nTPM
FANTOM5:315.3 Scaled Tags Per Million
Pig:362.0 nTPM
Mouse:438.8 nTPM
Allen mouse:18.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039504Antibody HPA056354
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.5
Sample id Sample description nTPM
Hippocampus
nTPM: 156.5
2621 Female, age 67, right hemisphere 309.1
2529 Female, age 94, left hemisphere 238.0
1911 Female, age 85, right hemisphere 150.6
2148 Female, age 91, left hemisphere 145.8
1855 Male, age 76, left hemisphere 55.3
1898 Male, age 80, left hemisphere 40.4
Dentate gyrus
nTPM: 93.7
2531 Female, age 67, both hemispheres 255.7
1927 Female, age 91, both hemispheres 166.4
2530 Female, age 94, left hemisphere 54.1
2528 Male, age 74, both hemispheres 41.4
2010 Male, age 76, both hemispheres 22.5
2246 Female, age 85, both hemispheres 21.9
Entorhinal gyrus
nTPM: 100.3
2613 Female, age 94, left hemisphere 236.0
2686 Male, age 75, right hemisphere 156.6
2764 Male, age 80, right hemisphere 81.1
1787 Male, age 76, left hemisphere 64.4
1938 Female, age 85, left hemisphere 61.5
2117 Female, age 91, right hemisphere 2.2
Hippocampus, CA1
nTPM: 117.3
2749 Male, age 80, left hemisphere 215.2
2527 Male, age 74, both hemispheres 208.9
2082 Female, age 91, right hemisphere 102.7
1873 Female, age 85, both hemispheres 40.4
2045 Male, age 76, both hemispheres 19.0
Hippocampus, CA2
nTPM: 83.8
1963 Male, age 80, left hemisphere 220.4
2113 Female, age 91, right hemisphere 163.3
2249 Male, age 74, both hemispheres 47.9
2437 Female, age 94, left hemisphere 44.4
1892 Male, age 76, both hemispheres 20.9
1940 Female, age 85, left hemisphere 5.9
Hippocampus, CA3
nTPM: 129.5
2861 Female, age 67, both hemispheres 300.1
2137 Male, age 80, left hemisphere 253.8
2620 Female, age 94, left hemisphere 197.2
1867 Male, age 76, both hemispheres 16.5
2436 Male, age 74, both hemispheres 9.3
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 99.6
2245 Female, age 91, both hemispheres 303.4
2622 Female, age 67, right hemisphere 246.5
2250 Female, age 67, right hemisphere 94.9
2693 Female, age 94, both hemispheres 70.9
2532 Female, age 72, left hemisphere 67.5
1933 Female, age 85, both hemispheres 57.9
2018 Male, age 76, both hemispheres 53.5
1990 Female, age 91, right hemisphere 47.0
2692 Male, age 74, both hemispheres 45.2
1850 Male, age 80, both hemispheres 9.6
Perirhinal gyrus
nTPM: 84.9
2521 Female, age 94, right hemisphere 145.4
1847 Female, age 91, left hemisphere 113.5
1794 Male, age 80, right hemisphere 92.4
1841 Female, age 85, right hemisphere 57.9
2848 Male, age 76, right hemisphere 15.3
Subiculum
nTPM: 13.9
2619 Male, age 74, both hemispheres 47.3
2729 Female, age 91, right hemisphere 21.7
1977 Female, age 85, both hemispheres 11.2
1901 Male, age 80, both hemispheres 3.2
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 358.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 358.0
Samples: 197

Max nTPM: 1404.0
Min nTPM: 11.3
Std nTPM: 289.4
Median nTPM: 287.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1404.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1352.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1341.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1221.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 1116.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1104.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1069.7
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 1041.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 981.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 966.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 959.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 315.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 315.3
FF:10153-102I9 76 years, female 352.2
FF:10169-103B7 60 years, female 278.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 362.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 237.3
Samples: 4

Max nTPM: 300.3
Min nTPM: 184.4
Sample A Female 300.3
Sample B Female 261.1
Sample C Male 203.2
Sample D Male 184.4
Entorhinal cortex
nTPM: 362.0
Samples: 4

Max nTPM: 482.0
Min nTPM: 287.4
Sample A Female 354.3
Sample B Female 324.4
Sample C Male 482.0
Sample D Male 287.4
Subiculum
nTPM: 257.2
Samples: 4

Max nTPM: 367.3
Min nTPM: 208.9
Sample A Female 367.3
Sample B Female 231.4
Sample C Male 221.0
Sample D Male 208.9
Ventral hippocampus
nTPM: 220.3
Samples: 4

Max nTPM: 314.7
Min nTPM: 155.2
Sample A Female 155.2
Sample B Female 174.3
Sample C Male 236.9
Sample D Male 314.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 438.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 438.8
Samples: 4

Max nTPM: 459.7
Min nTPM: 398.8
Sample A Male 459.7
Sample B Male 456.2
Sample C Female 398.8
Sample D Female 440.5
Hippocampal formation
nTPM: 407.6
Samples: 4

Max nTPM: 429.4
Min nTPM: 388.8
Sample A Male 429.4
Sample B Male 407.7
Sample C Female 404.3
Sample D Female 388.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.4
100144433 Antisense, RP_110407_02_C04, Mouse strain C57BL/6J (56 days, male) 18.4

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