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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:137.4 nTPM
FANTOM5:150.6 Scaled Tags Per Million
Pig:52.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA013713Antibody HPA068064
Glial cells LowNot detected
Neuronal cells MediumNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 137.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 137.4
Samples: 246

Max nTPM: 303.4
Min nTPM: 48.5
Std nTPM: 43.4
Median nTPM: 127.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 303.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 292.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 279.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 273.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 252.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 244.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 243.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 241.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 241.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 227.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 224.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 222.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 220.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 216.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 215.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 212.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 205.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 202.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 201.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 200.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 194.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 193.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 192.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 192.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 192.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 189.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 189.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 188.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 187.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 186.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 186.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 186.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 186.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 184.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 183.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 178.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 178.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 178.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 178.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 177.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 176.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 174.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 173.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 172.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 172.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 172.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 171.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 171.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 170.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 169.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 169.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 167.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 166.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 166.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 166.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 165.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 165.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 165.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 164.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 164.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 161.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 161.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 160.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 160.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 160.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 160.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 159.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 157.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 157.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 157.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 157.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 156.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 156.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 155.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 154.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 153.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 151.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 150.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 150.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 149.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 149.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 149.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 147.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 147.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 147.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 146.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 146.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 146.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 145.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 145.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 145.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 145.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 145.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 144.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 144.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 143.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 143.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 143.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 142.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 142.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 141.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 141.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 138.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 136.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 135.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 134.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 133.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 133.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 131.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 130.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 130.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 130.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 129.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 129.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 129.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 128.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 128.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 128.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 128.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 127.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 126.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 126.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 126.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 126.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 125.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 125.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 124.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 124.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 124.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 124.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 124.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 123.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 123.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 123.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 123.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 122.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 122.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 121.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 121.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 120.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 120.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 120.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 120.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 120.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 120.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 119.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 118.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 118.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 118.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 118.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 118.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 117.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 117.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 116.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 116.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 115.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 115.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 115.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 115.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 115.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 115.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 114.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 114.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 114.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 113.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 112.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 112.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 112.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 111.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 110.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 109.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 109.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 109.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 108.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 108.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 108.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 108.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 108.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 108.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 107.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 107.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 107.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 107.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 107.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 106.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 105.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 105.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 104.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 104.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 104.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 104.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 101.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 101.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 100.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 100.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 100.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 100.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 98.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 98.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 98.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 97.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 97.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 96.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 96.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 96.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 96.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 95.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 95.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 95.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 93.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 91.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 91.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 91.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 91.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 91.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 90.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 90.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 89.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 89.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 88.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 88.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 86.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 83.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 82.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 82.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 82.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 78.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 76.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 76.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 73.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 63.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 62.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 58.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 58.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 56.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 53.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 48.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 150.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 150.6
FF:10164-103B2 76 years, female 150.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 52.1
Pig sample Sample description nTPM
Caudate
nTPM: 52.1
Samples: 4

Max nTPM: 58.2
Min nTPM: 45.6
Sample A Female 45.6
Sample B Female 51.7
Sample C Male 52.9
Sample D Male 58.2

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