HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:13.7 nTPM
FANTOM5:45.5 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:31.0 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039343Antibody HPA040048
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.5
1898 Male, age 80, left hemisphere 13.1
2529 Female, age 94, left hemisphere 11.7
1855 Male, age 76, left hemisphere 11.6
1911 Female, age 85, right hemisphere 11.2
2621 Female, age 67, right hemisphere 10.8
2148 Female, age 91, left hemisphere 10.5
Dentate gyrus
nTPM: 11.4
1927 Female, age 91, both hemispheres 13.6
2246 Female, age 85, both hemispheres 12.0
2010 Male, age 76, both hemispheres 11.9
2528 Male, age 74, both hemispheres 10.7
2530 Female, age 94, left hemisphere 10.5
2531 Female, age 67, both hemispheres 9.8
Entorhinal gyrus
nTPM: 11.1
1938 Female, age 85, left hemisphere 13.6
1787 Male, age 76, left hemisphere 11.7
2764 Male, age 80, right hemisphere 10.8
2613 Female, age 94, left hemisphere 10.7
2117 Female, age 91, right hemisphere 10.3
2686 Male, age 75, right hemisphere 9.8
Hippocampus, CA1
nTPM: 13.1
2749 Male, age 80, left hemisphere 19.3
1873 Female, age 85, both hemispheres 12.7
2527 Male, age 74, both hemispheres 12.0
2045 Male, age 76, both hemispheres 10.9
2082 Female, age 91, right hemisphere 10.5
Hippocampus, CA2
nTPM: 12.5
1892 Male, age 76, both hemispheres 15.7
1940 Female, age 85, left hemisphere 14.3
2249 Male, age 74, both hemispheres 11.7
1963 Male, age 80, left hemisphere 11.5
2113 Female, age 91, right hemisphere 11.2
2437 Female, age 94, left hemisphere 10.6
Hippocampus, CA3
nTPM: 12.8
2137 Male, age 80, left hemisphere 17.9
1867 Male, age 76, both hemispheres 14.7
2436 Male, age 74, both hemispheres 12.4
1891 Female, age 85, both hemispheres 11.8
2620 Female, age 94, left hemisphere 10.7
2861 Female, age 67, both hemispheres 9.6
Parahippocampal cortex
nTPM: 11.8
1850 Male, age 80, both hemispheres 14.5
1933 Female, age 85, both hemispheres 12.5
1990 Female, age 91, right hemisphere 12.3
2245 Female, age 91, both hemispheres 12.0
2250 Female, age 67, right hemisphere 11.7
2693 Female, age 94, both hemispheres 11.7
2692 Male, age 74, both hemispheres 11.6
2018 Male, age 76, both hemispheres 10.8
2532 Female, age 72, left hemisphere 10.8
2622 Female, age 67, right hemisphere 9.9
Perirhinal gyrus
nTPM: 13.9
1847 Female, age 91, left hemisphere 15.9
1841 Female, age 85, right hemisphere 14.2
1794 Male, age 80, right hemisphere 14.0
2521 Female, age 94, right hemisphere 13.6
2848 Male, age 76, right hemisphere 11.5
Subiculum
nTPM: 11.0
1901 Male, age 80, both hemispheres 13.9
1977 Female, age 85, both hemispheres 11.6
2438 Female, age 94, left hemisphere 10.5
2042 Male, age 76, both hemispheres 10.2
2619 Male, age 74, both hemispheres 10.1
2729 Female, age 91, right hemisphere 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 39.5
Min nTPM: 5.8
Std nTPM: 4.6
Median nTPM: 13.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 32.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 24.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 23.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 23.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 21.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 21.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 21.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 21.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 21.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.5
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.5
Sample A Female 10.7
Sample B Female 11.2
Sample C Male 9.8
Sample D Male 7.5
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.9
Sample A Female 9.9
Sample B Female 14.0
Sample C Male 13.2
Sample D Male 10.6
Subiculum
nTPM: 9.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.1
Sample A Female 10.9
Sample B Female 9.1
Sample C Male 10.0
Sample D Male 7.1
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.9
Sample A Female 8.2
Sample B Female 7.9
Sample C Male 10.2
Sample D Male 10.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.0
Samples: 4

Max nTPM: 32.4
Min nTPM: 28.3
Sample A Male 31.3
Sample B Male 32.4
Sample C Female 28.3
Sample D Female 31.9
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 34.0
Min nTPM: 28.4
Sample A Male 28.4
Sample B Male 34.0
Sample C Female 30.8
Sample D Female 30.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
69353170 Antisense, RP_050412_01_G05, Mouse strain C57BL/6J (56 days, male) 6.5

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