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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bowman's capsule: High
Cells in glomeruli: Not detected
Collecting ducts: High
Distal tubules: High
Proximal tubules (cell body): High
Proximal tubules (microvilli): Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:481.7 nTPM
HPA:481.7 nTPM
GTEx:398.9 nTPM
FANTOM5:173.4 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA021995Antibody HPA022476Antibody CAB003783
Bowman's capsule High--
Cells in glomeruli Not detectedMediumMedium
Cells in tubules -HighHigh
Collecting ducts High--
Distal tubules High--
Proximal tubules (cell body) High--
Proximal tubules (microvilli) Not detected--






KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 481.7
overview
Female, age 58
Kidney sample 55
nTPM: 585.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 564.9
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 212.7
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 663.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 347.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 307.2
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 1085.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 335
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 233.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 398.9
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 398.9
Samples: 85

Max nTPM: 1949.8
Min nTPM: 51.8
Std nTPM: 309.3
Median nTPM: 315.6
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 1949.8
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 1297.2
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 1206.1
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 1062.4
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 969.6
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 960.0
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 942.1
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 799.3
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 782.3
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 741.3
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 665.2
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 660.5
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 659.7
GTEX-O5YV-1226-SM-EV795 60-69 years, female 649.4
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 592.0
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 553.3
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 543.9
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 523.3
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 519.2
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 500.0
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 494.4
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 489.4
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 467.4
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 460.0
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 457.0
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 449.9
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 449.7
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 418.7
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 415.1
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 402.8
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 401.9
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 386.2
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 385.9
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 384.5
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 383.6
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 364.4
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 357.4
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 353.9
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 342.7
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 336.3
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 325.3
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 324.6
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 315.6
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 313.3
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 308.8
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 307.2
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 301.7
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 297.9
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 297.0
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 289.8
GTEX-14C39-2126-SM-664OH 40-49 years, male 286.2
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 281.6
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 268.8
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 262.2
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 261.7
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 260.6
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 257.7
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 235.3
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 231.6
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 221.6
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 203.6
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 203.2
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 202.5
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 197.1
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 193.7
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 181.8
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 175.2
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 170.3
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 166.6
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 165.5
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 152.3
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 147.2
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 137.7
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 136.2
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 128.7
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 123.0
GTEX-13112-2126-SM-5GCO4 50-59 years, male 119.6
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 116.8
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 112.3
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 96.2
GTEX-12696-0926-SM-5FQTV 60-69 years, male 90.4
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 79.7
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 66.9
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 60.9
GTEX-RN64-1626-SM-48FD7 50-59 years, male 51.8
Show allShow less
Kidney - Medulla
Average nTPM: 173.2
Samples: 4

Max nTPM: 373.7
Min nTPM: 66.5
Std nTPM: 120.8
Median nTPM: 126.2
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 373.7
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 160.7
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 91.8
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 66.5

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 173.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 173.4
FF:10017-101C8 60,62,63 years, female 173.4

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